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Merge branch 'develop' into bug/JAL-4059_update_swingJS_for_JalviewJS_2_11_2_and_2_11_3
[jalview.git]
/
src
/
jalview
/
io
/
FormatAdapter.java
2023-01-11
Ben Soares
JAL-629 refactoring TFType. Remove i18n identification...
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commitdiff
2022-12-05
Ben Soares
JAL-629 implementation of --tempfac options
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diff to current
2022-03-08
Jim Procter
JAL-3438 spotless for 2.11.2.0
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diff to current
2022-02-11
Ben Soares
JAL-3949 Complete new abstracted logging framework...
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diff to current
2021-09-21
Ben Soares
JAL-3691 automatic insertion of Locale.ROOT to toUpperC...
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diff to current
2020-08-10
Jim Procter
JAL-3691 toUpperCase(Locale.ROOT) for all standard...
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diff to current
2018-07-20
gmungoc
JAL-3048 revised AlignExportSettings dialog with respon...
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diff to current
2018-06-27
hansonr
JAL-3032 part2 local file reading by JFileChooser
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2018-02-06
kiramt
Merge branch 'develop' into feature/JAL-2759
feature/JAL-2759
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2018-01-16
kiramt
JAL-2759 Moved alignment annotation code out of HiddenC...
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2018-01-10
gmungoc
JAL-1793 update spike branch to latest
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2017-11-30
Jim Procter
JAL-2849 fix
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2017-10-03
gmungoc
JAL-2738 copy to spikes/mungo
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2017-08-16
Jim Procter
JAL-2418 source formatting
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2017-06-09
gmungoc
JAL-2446 merged to spike branch
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2017-04-24
kiramt
JAL-2388 Hidden cols separated from column selection...
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2017-01-11
gmungoc
JAL-2344 separated AlignmentFileI into AlignmentFileRea...
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2017-01-11
gmungoc
JAL-2344 FileFormats singleton for formats, FileFormatI...
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2016-11-24
gmungoc
Further tweaks to get tests passing
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2016-11-24
gmungoc
FileFormatI further tweaks, clean compile
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2016-10-25
Jim Procter
JAL-2089 patch broken merge to master for Release 2...
releases/Release_2_10_0_Branch
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2016-10-06
Jim Procter
JAL-2089 Merge branch releases/Release_2_10_Branch...
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diff to current
2016-08-22
gmungoc
JAL-2175 code tidying
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2016-07-18
gmungoc
fileFormat enum wip changes
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diff to current
2016-07-12
gmungoc
FileFormat enum wip changes
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diff to current
2016-07-11
gmungoc
file format enum wip changes
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2015-10-16
Jim Procter
JAL-1925 update source version in license
Release_2_9_0b2
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2015-10-08
Jim Procter
JAL-1894 update year/version in copyright
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2015-09-22
Jim Procter
Merge branch 'develop' into Release_2_9_0b1_Branch
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2015-09-16
tcofoegbu
JAL-1486 off-by-one error bugfix
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2015-09-10
Jim Procter
JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...
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2015-09-10
Jim Procter
JAL-1645 source formatting and organise imports
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2015-08-10
tcofoegbu
JAL-1486 fixed flatfile output of visible region for...
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2015-06-26
tcofoegbu
JAL-1641 fixed broken functionalities after refactor
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2015-06-22
Jim Procter
JAL-1780 JAL-653 Format/AppletFormat import and export...
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2015-06-09
tcofoegbu
JAL-1488 bug-fix for incorrect start/end position in...
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2015-05-19
tcofoegbu
JAL-1641 Further refactoring of JSON export option...
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2015-05-12
tcofoegbu
JAL_793 implemented embeding source data in exported...
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2015-05-11
tcofoegbu
JAL-1641 cherry-picked changes into develop compatible...
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2015-03-06
Jim Procter
JAL-1683 replace year/version strings with tokens in...
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2015-03-06
Jim Procter
Merge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e...
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2014-12-22
Jim Procter
Merge: 497958b 68dcaa7
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2014-12-15
Jim Procter
JAL-1620 version bump and release notes
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2014-11-18
Jim Procter
Merge branch 'JAL-1587_promotedisorder' into develop
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2014-11-18
Jim Procter
JAL-674 make temperature factor, local secondary struct...
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2014-11-12
Charles Ofoegbu
Excluded HtmlFile.java dependencies from AppletFomatAdapter
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2014-09-12
j.procter@dundee...
JAL-1486 JAL-1543 pushed alignment viewport->view-...
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2014-06-06
Jim Procter
JAL-1517 source formatting
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2014-06-06
Jim Procter
JAL-1517 fix copyright for 2.8.2
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2014-06-05
Jim Procter
JAL-1517 update copyright to version 2.8.2
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2014-05-22
Jim Procter
JAL-1503 update version in GPL header
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2014-04-23
Jim Procter
JAL-1486 todo for 2.8.2 release
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2014-01-29
Jim Procter
JAL-1432 updated copyright notices
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commitdiff
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2012-10-22
jprocter
Jalview 2.8 Source Header
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2011-10-10
jprocter
update author list in license for (JAL-826)
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2011-09-27
jprocter
apply version 2.7 copyright
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2011-01-05
jprocter
JAL-727
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2010-09-23
jprocter
apply jalview code style
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commitdiff
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2010-09-23
jprocter
Jalview 2.6 source licence
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commitdiff
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diff to current
2010-06-03
jprocter
patch ensuring annotation is output correctly re *...
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2010-04-30
jprocter
jalview 2.5 release banner
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diff to current
2010-03-11
jprocter
pass any warning messages to StdErr - also todo to...
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2009-06-08
jprocter
apply gpl development license
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2008-11-04
jprocter
application specific validIOformat method
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2008-09-04
jprocter
merge from 2_4_Release branch
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2008-01-21
jprocter
javadoc
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2007-10-04
jprocter
selected region output also supports generation of...
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2007-10-02
jprocter
added colSel as a parameter formatAdaptor print functio...
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2007-07-25
jprocter
IO rearrangement for AMSAFile output
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2007-02-07
amwaterhouse
Formatting
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2007-01-18
amwaterhouse
File Parsing returns Alignments, not Sequence[]
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2006-08-21
amwaterhouse
header updated
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2006-07-19
amwaterhouse
Make new seq[] when modifying hidden bits
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2006-07-18
amwaterhouse
omitHiddenColumns
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2005-12-06
amwaterhouse
after merge
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2005-09-22
amwaterhouse
Create instance of FormatAdapter
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2005-08-23
amwaterhouse
Finalize formats
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2005-06-30
amwaterhouse
Formatting changes
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2005-06-08
amwaterhouse
Formatted source
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diff to current
2005-06-08
amwaterhouse
GPL license added
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2005-05-27
jprocter
Response to bug mantis?id=8187 - some quick hacks to...
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2005-05-26
jprocter
fairly pointless catch exception error information...
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diff to current
2005-05-03
amwaterhouse
formatAdapter.formats, remove redundant code
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2004-11-02
amwaterhouse
Jalview Imported Sources
start
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diff to current