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Merge branch 'develop' into groovy/JAL-2074_upgradeto2.4.4
[jalview.git]
/
src
/
jalview
/
renderer
/
2016-04-04
Jim Procter
JAL-2001 drop isSelected(int) in favour of original...
tree
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commitdiff
2016-04-04
Jim Procter
JAL-2001 use fast column selection test
tree
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commitdiff
2016-02-12
gmungoc
JAL-2008 avoid unnecessary repaints; signatures changed...
tree
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commitdiff
2016-01-11
gmungoc
JAL-1989 more unit tests and encapsulation for ColumnSe...
tree
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commitdiff
2015-09-10
Jim Procter
JAL-1645 licencing for new files in src
tree
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commitdiff
2015-09-10
Jim Procter
JAL-1645 source formatting and organise imports
tree
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commitdiff
2015-07-23
Jim Procter
Merge branch 'bug/JAL-1819_isNaN' into develop
tree
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commitdiff
2015-07-23
Jim Procter
JAL-1819 use Float.isNaN() to check for NaNs!
tree
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commitdiff
2015-07-15
gmungoc
JAL-1813 only pair up A-Z with a-z if annotation is RNA
tree
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commitdiff
2015-07-08
gmungoc
JAL-1759 merge from develop
tree
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commitdiff
2015-07-07
tcofoegbu
JAL-1805 test envirionment separation
tree
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commitdiff
2015-03-27
tcofoegbu
merge commit
tree
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commitdiff
2015-03-26
gmungoc
Merge develop to Release_2_8_3_Branch
tree
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commitdiff
2015-03-06
Jim Procter
JAL-1683 replace year/version strings with tokens in...
tree
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commitdiff
2015-03-06
Jim Procter
Merge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e...
tree
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commitdiff
2015-02-19
gmungoc
JAL-1665 refactored Sequence.getSequenceFeatures
features/sequenceFeatureRefactor
tree
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commitdiff
2015-01-09
Jim Procter
JAL-1483 formatting
tree
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commitdiff
2015-01-09
Jim Procter
JAL-1483 remember to look at base dataset sequence...
tree
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commitdiff
2014-12-22
Jim Procter
Merge: 497958b 68dcaa7
tree
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commitdiff
2014-12-15
Jim Procter
JAL-1620 version bump and release notes
tree
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commitdiff
2014-11-23
Jim Procter
employ test and secondary structure character for deter...
tree
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commitdiff
2014-11-23
Jim Procter
JAL-1569 formatting
tree
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commitdiff
2014-11-14
Jim Procter
Merge branch 'develop' into JAL-1483_featureBasedTreeCalc
tree
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commitdiff
2014-08-08
j.procter@dundee...
JAL-1482 feature renderer and manipulation code refacto...
tree
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commitdiff
2014-07-18
j.procter@dundee...
JAL-1520 switch between Protein and non-canonical RNA...
tree
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commitdiff
2014-06-06
Jim Procter
JAL-1520 fix unicode translation errors.
tree
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commitdiff
2014-06-06
Jim Procter
JAL-1520 fix unicode translation errors.
tree
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commitdiff
2014-06-06
Jim Procter
JAL-1517 source formatting
tree
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commitdiff
2014-06-06
Jim Procter
JAL-1517 fix copyright for 2.8.2
tree
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commitdiff
2014-06-05
Jim Procter
JAL-1517 update copyright to version 2.8.2
tree
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commitdiff
2014-06-05
Jim Procter
Merge branch 'docs/2_8_1_Release' into Release_2_8_2_Branch
tree
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commitdiff
2014-05-22
Jim Procter
JAL-1503 update version in GPL header
tree
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commitdiff
2014-02-18
Jim Procter
Merge branch 'JAL-1445' into develop
tree
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commitdiff
2014-01-29
Jim Procter
JAL-1432 updated copyright notices
tree
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commitdiff
2013-10-15
Jim Procter
JAL-1159 Merging 2.8.1 patches and Anne Menards work...
tree
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commitdiff
2013-07-12
Jim Procter
Merge branch 'JAL-1347' into develop
tree
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commitdiff
2013-07-12
Jim Procter
JAL-1347 RNA Structure consensus follows the alignment...
tree
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commitdiff
2013-07-12
Jim Procter
JAL-1347 flow control for display of profile data is...
tree
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commitdiff
2013-07-11
Jim Procter
Merge branch 'JAL-1347' into develop
tree
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commitdiff
2013-07-11
Jim Procter
JAL-1347 identify and set rendering settings for consen...
tree
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commitdiff
2013-07-11
Jim Procter
JAL-1347 refactor logic for setting display flags for...
tree
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commitdiff
2013-06-07
Jim Procter
Merge branch 'develop' into develop_m2_8_1_2
tree
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commitdiff
2013-06-07
Jim Procter
Merge branch 'JAL-1161_optimisingAnnotationPanel' into...
tree
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commitdiff
2013-05-24
Jim Procter
JAL-1291 TODO: revised graphGroup model so grouped...
tree
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commitdiff
2013-05-24
Jim Procter
JAL-1291 conditional output of rendering debugging...
tree
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commitdiff
2013-05-24
Jim Procter
JAL-1161 conditional parameters for controlling clipping
tree
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commitdiff
2013-05-24
Jim Procter
JAL-1292 avoid exception by using bitset of arbitrary...
tree
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commitdiff
2013-05-24
Jim Procter
JAL-1161 changed signature to allow clipping bounds...
tree
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commitdiff
2013-02-13
Jim Procter
Merge branch 'jims_annotate3d_update' into menard_final...
tree
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commitdiff
2013-01-18
jprocter
Merge branch 'JAL-1254-hotfix' into develop
tree
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commitdiff
2013-01-18
jprocter
JAL-1254 patch for NPE in annotation renderer when...
tree
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commitdiff
2012-12-07
jprocter
revised renderer and annotation model to support differ...
tree
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commitdiff
2012-11-15
jprocter
source formatting
tree
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commitdiff
2012-11-15
jprocter
Merge branch 'develop' into menard
tree
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commitdiff
2012-10-22
jprocter
Jalview 2.8 Source Header
tree
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commitdiff
2012-10-03
jprocter
formatting
tree
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commitdiff
2012-08-31
jprocter
Merge branch 'develop' into menard
tree
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commitdiff
2012-08-28
jprocter
formatting
tree
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commitdiff
2012-08-14
Anne Menard
last version stay many bugs ..
tree
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commitdiff
2012-07-10
Anne Menard
v2
tree
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commitdiff
2012-07-05
Anne Menard
Add support RNAML format
tree
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commitdiff
2012-06-14
jprocter
JAL-968 javadoc and return flag indicating if any of...
tree
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commitdiff
2012-06-12
jprocter
JAL-1115 - use local reference for annotation row
tree
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commitdiff
2012-06-07
jprocter
javatidy
tree
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commitdiff
2012-06-07
jprocter
JAL-967, JAL-1114, JAL-1115 - modified render and calcu...
tree
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commitdiff
2012-05-23
jprocter
JAL-958 - ensure logo is rendered even if consensus...
tree
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commitdiff
2012-05-22
jprocter
JAL-1065,JAL-1066 - propagated 863467bf6c59c0bc5368c8f3...
tree
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commitdiff
2012-05-16
jprocter
fixed JAL-1086: pass column index so colourscheme profi...
tree
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commitdiff
2012-05-16
jprocter
JAL-958 - don't try to draw all zero profiles
tree
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commitdiff
2012-05-16
jprocter
JAL-958 JAL-1086 formatting and remove old code
tree
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commitdiff
2012-04-20
jprocter
(JAL-1071) hacked the square matrix that stores the...
tree
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commitdiff
2011-11-03
jprocter
ensure we have valid fontMetrics - (NPE was raised...
tree
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commitdiff
2011-10-28
jprocter
JAL-885 - catch race condition when rna structure width...
tree
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commitdiff
2011-10-28
jprocter
(JAL-885 JAL-580) ignore invalid RNA structure lines
tree
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commitdiff
2011-10-28
jprocter
JAL-580 - display position where wuss parsing error...
tree
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commitdiff
2011-10-28
jprocter
NPE exception if annotation manually edited
tree
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commitdiff
2011-10-17
jprocter
(ahem) new renderer package containing api and renderin...
tree
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commitdiff