Merge commit
[jalview.git] / src / jalview / util /
2015-03-25 tcofoegbuMerge commit
2015-03-23 gmungocMerge branch 'features/sequenceFeatureRefactor' into...
2015-03-18 gmungocMerge hack/JAL-1617 fake DBRef to develop
2015-03-13 gmungocJAL-1686 @Override and/or TODO added to equals(Object...
2015-03-11 gmungocMerge branch 'develop' of https://source.jalview.org...
2015-03-10 gmungocJAL-1680 group consensus speeded up with a different...
2015-03-10 gmungocJAL-1681 show cDNA consensus on protein alignment ...
2015-03-06 Charles OfoegbuJAL-1668 added filtering and sorting capabilites
2015-03-06 Jim ProcterMerge branch 'develop' into features/JAL-845splitPaneMe...
2015-03-06 Jim ProcterJAL-1683 replace year/version strings with tokens in...
2015-03-06 Jim ProcterMerge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e...
2015-03-05 gmungocMerge branch 'develop' into features/JAL-845splitPaneMe...
2015-03-05 gmungocJAL-845 minor tidy / tests / javadoc tweaks
2015-03-04 gmungocJAL-845 bug fixes correcting linked editing
2015-03-03 gmungocJAL-845 refactor / typo fix
2015-03-03 gmungocJAL-845 implement alignment of protein to match cDNA...
2015-03-02 Charles Ofoegbuhouse keeping
2015-02-19 gmungocJAL-845 applet colour by tree; translate as cDNA; pull...
2015-02-09 gmungocMerge remote-tracking branch 'origin/develop' into
2015-02-06 gmungocJAL-845 further code/tests/refactoring
2015-02-03 gmungocJAL-845 column mapping speed-up
2015-02-03 gmungocJAL-845 redundant 'map to self' removed from buildSearc...
2015-02-03 gmungocJAL-845 code/refactoring/tests related to linking DNA...
2015-01-30 gmungocJAL-845 linked protein/dna 'slave' further PoC function... features/JAL-845linkedProteinDnaEditing
2015-01-23 gmungocJAL-1619 javadoc/tidy
2015-01-22 gmungocJAL-1619 refactoring / tests to support 'align linked...
2015-01-12 gmungocJAL-1619 load/align cDNA for protein (wip)
2014-12-28 gmungocJAL-845 first working linked edit protein -> cDNA
2014-12-22 Jim ProcterMerge: 497958b 68dcaa7
2014-12-16 gmungocJAL-845 move main method to 'test' class (needs further...
2014-12-15 Jim ProcterJAL-1620 version bump and release notes
2014-12-05 gmungocJAL-1609 refactored colour by sequence command, now...
2014-11-25 Charles OfoegbuJAL-1469 Added SVGOptions.java for lineart/text renderi...
2014-11-12 Charles Ofoegbuhouse-keeping
2014-11-12 Charles OfoegbuAdded support for SVG Export
2014-10-06 Jim ProcterJAL-1500 JAL-1265 patch to parse PDB database refs...
2014-10-03 Jim ProcterMerge branch 'Release_2_8_2_Branch' into Release_2_8_2_...
2014-09-23 darolmarJAL-1355
2014-09-18 gmungocJAL-1360 Javadoc/JUnit
2014-09-18 gmungocJAL-1360 refactored utility method to ColorUtils class
2014-06-06 Jim ProcterJAL-1517 source formatting
2014-06-06 Jim ProcterJAL-1517 fix copyright for 2.8.2
2014-06-05 Jim ProcterJAL-1517 update copyright to version 2.8.2
2014-06-05 Jim ProcterMerge branch 'docs/2_8_1_Release' into Release_2_8_2_Branch
2014-05-22 Jim ProcterJAL-1503 update version in GPL header
2014-04-23 Jim ProcterMerge branch 'jims_marckhacks' into develop
2014-04-21 Jim ProcterJAL-1383 scrubbed envision GUI and documentation
2014-04-21 Jim ProcterMerge branch 'jims_marckhacks' into develop
2014-04-21 Jim ProcterJAL-1485
2014-02-21 Jim ProcterMerge branch 'pathc_JAL-1354' into develop
2014-02-21 Jim ProcterJAL-1354 use real var-args method signature to avoid...
2014-02-18 Jim ProcterMerge branch 'JAL-1445' into develop
2014-02-03 Jim ProcterMerge branch 'Release_2_8_1_Branch_i18n' into try_r20b1...
2014-02-03 Jim ProcterMerge branch 'Release_2_8_0b1_Branch' into try_r20b1_merge
2014-01-29 Jim ProcterJAL-1432 updated copyright notices
2013-12-25 darolmarJAL-1355 (basic i18n support)
2013-10-14 Jim ProcterMerge branch 'develop' into dev_from_2_8_1
2013-10-11 Jim ProcterJAL-1354 watch for exceptions when initialising (Securi...
2013-08-14 Jim ProcterJAL-1354 replacement of bare strings in GUI dialogs...
2012-11-17 jprocterstore chaincode on pdbentry
2012-10-22 jprocterJalview 2.8 Source Header
2012-10-03 jprocterformatting
2012-08-28 jprocterJAL-1149 patch
2012-03-01 jprocterMerge branch 'Release_2_7_Branch' into develop
2011-12-08 jproctersimple escape utility class for JAL-1023 patch
2011-10-10 jprocterupdate author list in license for (JAL-826)
2011-10-04 jprocterMerge remote-tracking branch 'remotes/origin/2_5_1_rna_...
2011-09-27 jprocterapply version 2.7 copyright
2011-08-19 jprocterJAL-908 JAL-701 refactored HTML escape/unescape code...
2011-07-25 janengelhardtStart merging of Laurens Code
2011-05-30 jprocterfirst patch for JAL-838 - allow new typed of PID calcs
2010-09-23 jprocterapply jalview code style
2010-09-23 jprocterJalview 2.6 source licence
2010-09-10 jprocterearly bail out for long urls, and threaded off group...
2010-09-09 jprocterwrap tooltips and revise layout (JAL-644)
2010-04-30 jprocterjalview 2.5 release banner
2010-04-02 jproctercli length limit
2010-04-02 jprocterurllength limit and more efficient url construction
2010-03-26 jproctersync for cvs wierdness
2010-03-26 jproctersync for cvs wierdness
2010-02-09 jproctertoken replacement engine for generation of urls for...
2010-02-09 jprocterqsort objects on integers
2009-07-24 jprocterheadless test
2009-06-19 jprocterdebug comments
2009-06-19 jprocternew coverage comparison - no test case in main method yet
2009-06-12 jprocterjavadoc
2009-06-08 jprocterapply gpl development license
2009-02-24 jprocterallow label to be set independently of parsed input...
2008-11-12 jprocterjar inputstream provider enabling multiple jar entries...
2008-09-04 jproctermerge from 2_4_Release branch
2008-08-11 jprocterregular expression based URL link generation
2008-08-01 jproctertodo
2007-11-30 jprocterbugfixed MapList (must be propagated to vamsas version...
2007-10-26 jprocternew applet and application utility class for platform...
2007-10-24 jprocteradd parsed PDB reference to sequences
2007-09-29 jprocterjavadoc
2007-09-07 jprocteradded a more general DBRef search interface
2007-07-25 jprocteruniprot synonym
2007-07-13 jprocternew search method for finding references like other...
2007-07-13 jprocterbugfix and comments
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