JAL-840 generate fragments of clustal.html documentation via ClustalxColurSchemeTest...
[jalview.git] / test / jalview / schemes /
2023-02-10 James ProcterJAL-840 generate fragments of clustal.html documentatio...
2022-11-13 Ben SoaresJAL-4019 Added tests for new Nucleotide sequence detection
2022-03-08 Jim ProcterJAL-3746 apply copyright to tests spike/try_spotless_JAL-3438
2022-03-08 Jim ProcterJAL-3438 spotless for 2.11.2.0
2020-04-21 gmungocJAL-1889 corrected wait for consensus to be calculated
2019-06-26 Jim ProcterJAL-3330 test to verify sub/attributeName array is...
2019-03-11 gmungocMerge branch 'feature/JAL-3127_seqidChainshading' into...
2019-03-11 gmungocJAL-3206 strict above/below threshold test restored
2019-03-05 gmungocMerge remote-tracking branch 'origin/features/JAL-2620a...
2019-03-05 gmungocMerge remote-tracking branch 'origin/bug/JAL-3049colour...
2019-03-04 gmungocJAL-3206 avoid divide by zero when threshold is graphMi...
2019-03-04 gmungocMerge branch 'bug/JAL-3120restoreFeatureColour' into...
2019-03-01 gmungocMerge branch 'bug/JAL-2791exportFilteredFeature' into...
2019-02-25 gmungocJAL-3200 fast lookup of DSSP3 notation
2018-11-20 Jim ProcterJAL-3127 Sequence ID Colour and nominal spanish translation
2018-11-19 Jim ProcterJAL-3127 drop redundant hidden representative sequences...
2018-11-01 gmungocMerge branch 'feature/JAL-3143ensemblJSON' into
2018-10-09 Jim ProcterJAL-3127 pass reference to AlignViewportI when creating...
2018-09-27 gmungocJAL-2791 new method to test if feature fails colour...
2018-09-21 gmungocJAL-3120 preserve feature colour/mincolour/maxcolour... bug/JAL-3120restoreFeatureColour
2018-09-20 gmungocJAL-2843 help text for colour by attribute, feature...
2018-06-29 gmungocJAL-3049 JAL-2069 colour icon tooltip including by...
2018-03-16 gmungocJAL-2620 alternative genetic code translation tables
2018-01-10 gmungocJAL-1793 update spike branch to latest
2017-12-11 gmungocJAL-2843 add colour by attribute, and no value colour...
2017-11-22 gmungocJAL-2069 spike updated with latest (FeatureTypeSettings)
2017-11-16 gmungocJAL-2835 update test for array-valued attribute name
2017-11-16 gmungocJAL-2835 test updated for colour by 'nested attribute'
2017-11-15 gmungocJAL-2835 spike updated with latest
2017-11-15 gmungocJAL-1270 add missing "Functional" to tests
2017-11-07 gmungocJAL-2069 update spike with latest
2017-11-07 gmungocJAL-2069 corrected overloaded constructor behaviour
2017-11-07 gmungocJAL-2069 update spike branch with latest
2017-11-07 gmungocJAL-2069 add attributeName and noValueColour to Feature...
2017-07-24 gmungocspike branch updated from latest features/JAL-2446
2017-07-24 gmungocJAL-2624 additional tests for FeatureColour.getColour(),
2017-07-23 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-06-27 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-06-09 gmungocJAL-2446 merged to spike branch
2017-06-06 gmungocJAL-2589 correct colour for Gap in Score and User Defin...
2017-06-02 gmungocJAL-2526 additional tests for findPosition with/without...
2017-05-25 gmungocJAL-2050 make SequenceFeature.score final, adjust const...
2017-05-24 gmungocJAL-2506 relocate Uniprot binding classes, bind to...
2017-04-07 gmungocMerge branch 'develop' into features/JAL-2393customMatrices
2017-03-30 gmungocJAL-2346 always run setup! bug/JAL-2346annotationChoice
2017-03-30 gmungocJAL-2346 more test coverage for AnnotationColourGradient
2017-03-30 gmungocMerge branch 'develop' into bug/JAL-2346annotationChoice
2017-03-23 gmungocMerge branch 'develop' into features/JAL-2393customMatrices
2017-03-15 gmungocJAL-2443 push getResidueBoxColour inside getResidueColour
2017-02-21 gmungocMerge branch 'develop' into features/JAL-2393customMatrices
2017-02-20 gmungocJAL-2403 ScoreModelI now DistanceModelI, ScoreMatrix...
2017-02-20 Jim ProcterMerge branch 'features/JAL-2379pcaMemory' into develop
2017-02-17 gmungocJAL-2416 scoreMatrices removed from ResidueProperties
2017-02-14 gmungocMerge branch 'develop' into bug/JAL-2346annotationChoice
2017-02-13 gmungocJAL-1632 first cut of Tree chooser dialog and ScoreMode...
2017-02-09 gmungocJAL-2371 no test for lower case consensus as not expect...
2017-02-09 gmungocMerge branch 'develop' into features/JAL-2379pcaMemory features/JAL-2379pcaMemory
2017-02-07 gmungocJAL-2397 PCA gap cost uses last column of score matrix
2017-02-06 gmungocJAL-2379 computePairwiseScores() moved to ScoreMatrix
2017-02-03 gmungocJAL-2379 'direct' pairwise score calculation for PCA...
2017-01-31 gmungocJAL-2371 rename global/viewportColourScheme to residueS...
2017-01-31 gmungocJAL-2385 more tests/bug fixes mostly for gui.SliderPane...
2017-01-27 gmungocJAL-2371 CollectionColourScheme renamed ResidueShader...
2017-01-27 gmungocJAL-2360 JAL-2371 updates from review CR-JAL-1
2017-01-09 gmungocJAL-2371 remove ColourSchemeI.findColour(c), pure inter...
2017-01-05 gmungocJAL-2371 add test for toggling ignore gaps with PID...
2017-01-04 gmungocJAL-2371 CollectionColourScheme wraps ColourSchemeI
2016-12-29 gmungocJAL-2630 first pass groovy colour scheme (with slight...
2016-12-23 gmungocJAL-2360 removed UserDefinedColours.userColourSchemes
2016-12-21 gmungocJAL-2360 simplified code to create a new colour scheme
2016-12-21 gmungocJAL-2360 ColourMenuHelper now builds and selects items...
2016-12-20 gmungocJAL-2360 testRegisterColourScheme to demonstrate a...
2016-12-20 gmungocJAL-2360 ColourSchemes holds configured schemes, AlignF...
2016-12-19 gmungocJAL-2360 amended toAppletParameter() for reproducible...
2016-12-16 gmungocJAL-2360 added UserColourScheme.toAppletParameter+test...
2016-12-16 gmungocJAL-2360 getColour() renamed to getColourScheme(),...
2016-12-16 gmungocJAL-2360 refactoring for JalviewColourScheme enum,
2016-12-14 gmungocJAL-2360 test added
2016-12-12 gmungocJAL-2362 return correct lower-case colour; Javadoc...
2016-12-02 gmungocUnit tests added, minor refactoring
2016-12-02 gmungocJAL-2346 unit test for annotation drop-down list builder
2016-11-28 tcofoegbuMerge branch 'features/JAL-2326_JOptionPane-refactoring...
2016-11-24 tcofoegbuJAL-2326 added setup method for JvOptionPane in all... features/JAL-2326_JOptionPane-refactoring
2016-11-24 Jim ProcterJAL-2325 apply license to new source files
2016-11-17 gmungocJAL-98 ProfilesI container for profiles for columns
2016-11-08 gmungocJAL-2301 made T hydrophobic as per the cited conservati...
2016-11-02 gmungocJAL-98 ProfileI interface for Profile
2016-11-02 gmungocJAL-98 Profile and ResidueCount moved from analysis...
2016-11-01 gmungocJAL-98 use Integer constants; tests added for propHash...
2016-10-26 gmungocJAL-2286 javadoc, refactor, unit tests for threshold...
2016-10-25 Jim ProcterJAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch
2016-10-06 Jim ProcterJAL-2089 Merge branch releases/Release_2_10_Branch...
2016-10-05 Jim ProcterJAL-2189 apply license
2016-10-05 Jim ProcterJAL-2189 format tests
2016-09-22 gmungocJAL-1421 typed ResidueProperties.propHash; JAL-2176...
2016-06-23 Jim ProcterMerge branch 'develop' into merge_JAL-2110
2016-06-23 Jim ProcterJAL-1270 test group fix
2016-06-22 gmungocJAL-2015 fixed bug in copy constructor and added tests
2016-05-10 gmungocMerge branch 'develop' into features/JAL-1956_featureStyles
2016-02-25 gmungocJAL-2015 parse/write Jalview feature format pushed...
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