| 2023-02-10 |
James Procter | JAL-840 generate fragments of clustal.html documentatio... |
tree | commitdiff |
| 2022-11-13 |
Ben Soares | JAL-4019 Added tests for new Nucleotide sequence detection |
tree | commitdiff |
| 2022-03-08 |
Jim Procter | JAL-3746 apply copyright to tests spike/try_spotless_JAL-3438 |
tree | commitdiff |
| 2022-03-08 |
Jim Procter | JAL-3438 spotless for 2.11.2.0 |
tree | commitdiff |
| 2020-04-21 |
gmungoc | JAL-1889 corrected wait for consensus to be calculated |
tree | commitdiff |
| 2019-06-26 |
Jim Procter | JAL-3330 test to verify sub/attributeName array is... |
tree | commitdiff |
| 2019-03-11 |
gmungoc | Merge branch 'feature/JAL-3127_seqidChainshading' into... |
tree | commitdiff |
| 2019-03-11 |
gmungoc | JAL-3206 strict above/below threshold test restored |
tree | commitdiff |
| 2019-03-05 |
gmungoc | Merge remote-tracking branch 'origin/features/JAL-2620a... |
tree | commitdiff |
| 2019-03-05 |
gmungoc | Merge remote-tracking branch 'origin/bug/JAL-3049colour... |
tree | commitdiff |
| 2019-03-04 |
gmungoc | JAL-3206 avoid divide by zero when threshold is graphMi... |
tree | commitdiff |
| 2019-03-04 |
gmungoc | Merge branch 'bug/JAL-3120restoreFeatureColour' into... |
tree | commitdiff |
| 2019-03-01 |
gmungoc | Merge branch 'bug/JAL-2791exportFilteredFeature' into... |
tree | commitdiff |
| 2019-02-25 |
gmungoc | JAL-3200 fast lookup of DSSP3 notation |
tree | commitdiff |
| 2018-11-20 |
Jim Procter | JAL-3127 Sequence ID Colour and nominal spanish translation |
tree | commitdiff |
| 2018-11-19 |
Jim Procter | JAL-3127 drop redundant hidden representative sequences... |
tree | commitdiff |
| 2018-11-01 |
gmungoc | Merge branch 'feature/JAL-3143ensemblJSON' into |
tree | commitdiff |
| 2018-10-09 |
Jim Procter | JAL-3127 pass reference to AlignViewportI when creating... |
tree | commitdiff |
| 2018-09-27 |
gmungoc | JAL-2791 new method to test if feature fails colour... |
tree | commitdiff |
| 2018-09-21 |
gmungoc | JAL-3120 preserve feature colour/mincolour/maxcolour... bug/JAL-3120restoreFeatureColour |
tree | commitdiff |
| 2018-09-20 |
gmungoc | JAL-2843 help text for colour by attribute, feature... |
tree | commitdiff |
| 2018-06-29 |
gmungoc | JAL-3049 JAL-2069 colour icon tooltip including by... |
tree | commitdiff |
| 2018-03-16 |
gmungoc | JAL-2620 alternative genetic code translation tables |
tree | commitdiff |
| 2018-01-10 |
gmungoc | JAL-1793 update spike branch to latest |
tree | commitdiff |
| 2017-12-11 |
gmungoc | JAL-2843 add colour by attribute, and no value colour... |
tree | commitdiff |
| 2017-11-22 |
gmungoc | JAL-2069 spike updated with latest (FeatureTypeSettings) |
tree | commitdiff |
| 2017-11-16 |
gmungoc | JAL-2835 update test for array-valued attribute name |
tree | commitdiff |
| 2017-11-16 |
gmungoc | JAL-2835 test updated for colour by 'nested attribute' |
tree | commitdiff |
| 2017-11-15 |
gmungoc | JAL-2835 spike updated with latest |
tree | commitdiff |
| 2017-11-15 |
gmungoc | JAL-1270 add missing "Functional" to tests |
tree | commitdiff |
| 2017-11-07 |
gmungoc | JAL-2069 update spike with latest |
tree | commitdiff |
| 2017-11-07 |
gmungoc | JAL-2069 corrected overloaded constructor behaviour |
tree | commitdiff |
| 2017-11-07 |
gmungoc | JAL-2069 update spike branch with latest |
tree | commitdiff |
| 2017-11-07 |
gmungoc | JAL-2069 add attributeName and noValueColour to Feature... |
tree | commitdiff |
| 2017-07-24 |
gmungoc | spike branch updated from latest features/JAL-2446 |
tree | commitdiff |
| 2017-07-24 |
gmungoc | JAL-2624 additional tests for FeatureColour.getColour(), |
tree | commitdiff |
| 2017-07-23 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
| 2017-06-27 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
| 2017-06-09 |
gmungoc | JAL-2446 merged to spike branch |
tree | commitdiff |
| 2017-06-06 |
gmungoc | JAL-2589 correct colour for Gap in Score and User Defin... |
tree | commitdiff |
| 2017-06-02 |
gmungoc | JAL-2526 additional tests for findPosition with/without... |
tree | commitdiff |
| 2017-05-25 |
gmungoc | JAL-2050 make SequenceFeature.score final, adjust const... |
tree | commitdiff |
| 2017-05-24 |
gmungoc | JAL-2506 relocate Uniprot binding classes, bind to... |
tree | commitdiff |
| 2017-04-07 |
gmungoc | Merge branch 'develop' into features/JAL-2393customMatrices |
tree | commitdiff |
| 2017-03-30 |
gmungoc | JAL-2346 always run setup! bug/JAL-2346annotationChoice |
tree | commitdiff |
| 2017-03-30 |
gmungoc | JAL-2346 more test coverage for AnnotationColourGradient |
tree | commitdiff |
| 2017-03-30 |
gmungoc | Merge branch 'develop' into bug/JAL-2346annotationChoice |
tree | commitdiff |
| 2017-03-23 |
gmungoc | Merge branch 'develop' into features/JAL-2393customMatrices |
tree | commitdiff |
| 2017-03-15 |
gmungoc | JAL-2443 push getResidueBoxColour inside getResidueColour |
tree | commitdiff |
| 2017-02-21 |
gmungoc | Merge branch 'develop' into features/JAL-2393customMatrices |
tree | commitdiff |
| 2017-02-20 |
gmungoc | JAL-2403 ScoreModelI now DistanceModelI, ScoreMatrix... |
tree | commitdiff |
| 2017-02-20 |
Jim Procter | Merge branch 'features/JAL-2379pcaMemory' into develop |
tree | commitdiff |
| 2017-02-17 |
gmungoc | JAL-2416 scoreMatrices removed from ResidueProperties |
tree | commitdiff |
| 2017-02-14 |
gmungoc | Merge branch 'develop' into bug/JAL-2346annotationChoice |
tree | commitdiff |
| 2017-02-13 |
gmungoc | JAL-1632 first cut of Tree chooser dialog and ScoreMode... |
tree | commitdiff |
| 2017-02-09 |
gmungoc | JAL-2371 no test for lower case consensus as not expect... |
tree | commitdiff |
| 2017-02-09 |
gmungoc | Merge branch 'develop' into features/JAL-2379pcaMemory features/JAL-2379pcaMemory |
tree | commitdiff |
| 2017-02-07 |
gmungoc | JAL-2397 PCA gap cost uses last column of score matrix |
tree | commitdiff |
| 2017-02-06 |
gmungoc | JAL-2379 computePairwiseScores() moved to ScoreMatrix |
tree | commitdiff |
| 2017-02-03 |
gmungoc | JAL-2379 'direct' pairwise score calculation for PCA... |
tree | commitdiff |
| 2017-01-31 |
gmungoc | JAL-2371 rename global/viewportColourScheme to residueS... |
tree | commitdiff |
| 2017-01-31 |
gmungoc | JAL-2385 more tests/bug fixes mostly for gui.SliderPane... |
tree | commitdiff |
| 2017-01-27 |
gmungoc | JAL-2371 CollectionColourScheme renamed ResidueShader... |
tree | commitdiff |
| 2017-01-27 |
gmungoc | JAL-2360 JAL-2371 updates from review CR-JAL-1 |
tree | commitdiff |
| 2017-01-09 |
gmungoc | JAL-2371 remove ColourSchemeI.findColour(c), pure inter... |
tree | commitdiff |
| 2017-01-05 |
gmungoc | JAL-2371 add test for toggling ignore gaps with PID... |
tree | commitdiff |
| 2017-01-04 |
gmungoc | JAL-2371 CollectionColourScheme wraps ColourSchemeI |
tree | commitdiff |
| 2016-12-29 |
gmungoc | JAL-2630 first pass groovy colour scheme (with slight... |
tree | commitdiff |
| 2016-12-23 |
gmungoc | JAL-2360 removed UserDefinedColours.userColourSchemes |
tree | commitdiff |
| 2016-12-21 |
gmungoc | JAL-2360 simplified code to create a new colour scheme |
tree | commitdiff |
| 2016-12-21 |
gmungoc | JAL-2360 ColourMenuHelper now builds and selects items... |
tree | commitdiff |
| 2016-12-20 |
gmungoc | JAL-2360 testRegisterColourScheme to demonstrate a... |
tree | commitdiff |
| 2016-12-20 |
gmungoc | JAL-2360 ColourSchemes holds configured schemes, AlignF... |
tree | commitdiff |
| 2016-12-19 |
gmungoc | JAL-2360 amended toAppletParameter() for reproducible... |
tree | commitdiff |
| 2016-12-16 |
gmungoc | JAL-2360 added UserColourScheme.toAppletParameter+test... |
tree | commitdiff |
| 2016-12-16 |
gmungoc | JAL-2360 getColour() renamed to getColourScheme(),... |
tree | commitdiff |
| 2016-12-16 |
gmungoc | JAL-2360 refactoring for JalviewColourScheme enum, |
tree | commitdiff |
| 2016-12-14 |
gmungoc | JAL-2360 test added |
tree | commitdiff |
| 2016-12-12 |
gmungoc | JAL-2362 return correct lower-case colour; Javadoc... |
tree | commitdiff |
| 2016-12-02 |
gmungoc | Unit tests added, minor refactoring |
tree | commitdiff |
| 2016-12-02 |
gmungoc | JAL-2346 unit test for annotation drop-down list builder |
tree | commitdiff |
| 2016-11-28 |
tcofoegbu | Merge branch 'features/JAL-2326_JOptionPane-refactoring... |
tree | commitdiff |
| 2016-11-24 |
tcofoegbu | JAL-2326 added setup method for JvOptionPane in all... features/JAL-2326_JOptionPane-refactoring |
tree | commitdiff |
| 2016-11-24 |
Jim Procter | JAL-2325 apply license to new source files |
tree | commitdiff |
| 2016-11-17 |
gmungoc | JAL-98 ProfilesI container for profiles for columns |
tree | commitdiff |
| 2016-11-08 |
gmungoc | JAL-2301 made T hydrophobic as per the cited conservati... |
tree | commitdiff |
| 2016-11-02 |
gmungoc | JAL-98 ProfileI interface for Profile |
tree | commitdiff |
| 2016-11-02 |
gmungoc | JAL-98 Profile and ResidueCount moved from analysis... |
tree | commitdiff |
| 2016-11-01 |
gmungoc | JAL-98 use Integer constants; tests added for propHash... |
tree | commitdiff |
| 2016-10-26 |
gmungoc | JAL-2286 javadoc, refactor, unit tests for threshold... |
tree | commitdiff |
| 2016-10-25 |
Jim Procter | JAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch |
tree | commitdiff |
| 2016-10-06 |
Jim Procter | JAL-2089 Merge branch releases/Release_2_10_Branch... |
tree | commitdiff |
| 2016-10-05 |
Jim Procter | JAL-2189 apply license |
tree | commitdiff |
| 2016-10-05 |
Jim Procter | JAL-2189 format tests |
tree | commitdiff |
| 2016-09-22 |
gmungoc | JAL-1421 typed ResidueProperties.propHash; JAL-2176... |
tree | commitdiff |
| 2016-06-23 |
Jim Procter | Merge branch 'develop' into merge_JAL-2110 |
tree | commitdiff |
| 2016-06-23 |
Jim Procter | JAL-1270 test group fix |
tree | commitdiff |
| 2016-06-22 |
gmungoc | JAL-2015 fixed bug in copy constructor and added tests |
tree | commitdiff |
| 2016-05-10 |
gmungoc | Merge branch 'develop' into features/JAL-1956_featureStyles |
tree | commitdiff |
| 2016-02-25 |
gmungoc | JAL-2015 parse/write Jalview feature format pushed... |
tree | commitdiff |
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git://source.jalview.org / jalview.git / history