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[jalview.git] / src / jalview / appletgui / AnnotationPanel.java

2018-01-15	kiramt	JAL-2759 Rename findColumnPosition and adjustForHiddenC...	blob \| commitdiff
2017-11-22	gmungoc	JAL-2069 spike updated with latest (FeatureTypeSettings)	blob \| commitdiff \| diff to current
2017-11-15	kiramt	JAL-2831 ported to applet	blob \| commitdiff \| diff to current
2017-10-31	kiramt	Merge remote-tracking branch 'origin/develop' into...	blob \| commitdiff \| diff to current
2017-10-24	gmungoc	JAL-2738 update spike branch with latest	blob \| commitdiff \| diff to current
2017-10-13	kiramt	JAL-2774 Created single event for update to both start...	blob \| commitdiff \| diff to current
2017-10-12	Jim Procter	JAL-2773 add new flag to paintAlignment(updateOverview... features/JAL-2773_dontalwaysrecolourstructureonrepaintofoverview	blob \| commitdiff \| diff to current
2017-10-03	gmungoc	JAL-2738 copy to spikes/mungo	blob \| commitdiff \| diff to current
2017-08-16	Jim Procter	JAL-2418 source formatting	blob \| commitdiff \| diff to current
2017-07-31	kiramt	JAL-2634 Added null test for graphics in AnnotationPane...	blob \| commitdiff \| diff to current
2017-07-24	gmungoc	spike branch updated from latest features/JAL-2446	blob \| commitdiff \| diff to current
2017-06-28	kiramt	JAL-2600 updates following review	blob \| commitdiff \| diff to current
2017-06-09	gmungoc	JAL-2446 merged to spike branch	blob \| commitdiff \| diff to current
2017-05-15	kiramt	Merge remote-tracking branch 'origin/develop' into...	blob \| commitdiff \| diff to current
2017-05-11	kiramt	JAL-2491 First port to applet	blob \| commitdiff \| diff to current
2017-04-24	kiramt	JAL-2388 Hidden cols separated from column selection...	blob \| commitdiff \| diff to current
2017-03-16	kiramt	JAL-2388 Applied ViewportRanges to code	blob \| commitdiff \| diff to current
2017-02-27	kiramt	JAL-2388 Make startRes,startSeq,endRes,endSeq private...	blob \| commitdiff \| diff to current
2016-10-25	Jim Procter	JAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch	blob \| commitdiff \| diff to current
2016-10-06	Jim Procter	JAL-2089 Merge branch releases/Release_2_10_Branch...	blob \| commitdiff \| diff to current
2016-08-18	gmungoc	Merge branch 'develop' into bug/JAL-1841rnaSecStr	blob \| commitdiff \| diff to current
2016-08-17	gmungoc	JAL-2146 status message now with formatted residue...	blob \| commitdiff \| diff to current
2016-08-17	gmungoc	JAL-2173 don't remove annotation from hidden columns	blob \| commitdiff \| diff to current
2016-08-16	gmungoc	JAL-2171 matching bracket default character for rna...	blob \| commitdiff \| diff to current
2016-08-12	gmungoc	JAL-2171 default SS symbol to existing (if present)	blob \| commitdiff \| diff to current
2016-08-10	gmungoc	JAL-2146 show Column no [Sequence no [Residue / pos...	blob \| commitdiff \| diff to current
2016-04-04	Jim Procter	JAL-2001 TODO for new ColumnSelection API	blob \| commitdiff \| diff to current
2016-01-11	gmungoc	JAL-1989 more unit tests and encapsulation for ColumnSe...	blob \| commitdiff \| diff to current
2015-10-16	Jim Procter	JAL-1925 update source version in license Release_2_9_0b2	blob \| commitdiff \| diff to current
2015-10-08	Jim Procter	JAL-1894 update year/version in copyright	blob \| commitdiff \| diff to current
2015-09-10	Jim Procter	JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...	blob \| commitdiff \| diff to current
2015-03-26	gmungoc	Merge develop to Release_2_8_3_Branch	blob \| commitdiff \| diff to current
2015-03-06	Jim Procter	JAL-1683 replace year/version strings with tokens in...	blob \| commitdiff \| diff to current
2014-12-22	Jim Procter	Merge: 497958b 68dcaa7	blob \| commitdiff \| diff to current
2014-12-15	Jim Procter	JAL-1620 version bump and release notes	blob \| commitdiff \| diff to current
2014-11-23	Jim Procter	JAL-1569 interactive editing of secondary structure...	blob \| commitdiff \| diff to current
2014-06-06	Jim Procter	JAL-1517 source formatting	blob \| commitdiff \| diff to current
2014-06-06	Jim Procter	JAL-1517 fix copyright for 2.8.2	blob \| commitdiff \| diff to current
2014-06-05	Jim Procter	JAL-1517 update copyright to version 2.8.2	blob \| commitdiff \| diff to current
2014-05-27	Jim Procter	JAL-1402 conditional logic to ensure annotation & label...	blob \| commitdiff \| diff to current
2014-05-22	Jim Procter	JAL-1503 update version in GPL header	blob \| commitdiff \| diff to current
2014-04-24	Jim Procter	JAL-1232 fix - ensure display all columns flag is set...	blob \| commitdiff \| diff to current
2014-02-03	Jim Procter	Merge branch 'Release_2_8_0b1_Branch' into try_r20b1_merge	blob \| commitdiff \| diff to current
2014-01-29	Jim Procter	JAL-1432 updated copyright notices	blob \| commitdiff \| diff to current
2013-08-29	darolmar	i18n	blob \| commitdiff \| diff to current
2013-06-23	Jim Procter	JAL-1230 update alignment state for annotation edits...	blob \| commitdiff \| diff to current
2013-05-24	Jim Procter	JAL-1161 conditional parameters for controlling clipping	blob \| commitdiff \| diff to current
2013-05-24	Jim Procter	JAL-1161 changed signature to allow clipping bounds...	blob \| commitdiff \| diff to current
2012-11-08	jprocter	tidy imports	blob \| commitdiff \| diff to current
2012-10-22	jprocter	Jalview 2.8 Source Header	blob \| commitdiff \| diff to current
2012-10-03	jprocter	formatting	blob \| commitdiff \| diff to current
2012-08-29	jprocter	JAL-1155 fix panel length calculation for grouped graph...	blob \| commitdiff \| diff to current
2012-07-01	jprocter	ensure all annotation dependent rendering gets refreshed	blob \| commitdiff \| diff to current
2012-06-13	jprocter	javatidy	blob \| commitdiff \| diff to current
2011-10-28	jprocter	(JAL-970) interactive editing of RNA helix annotation...	blob \| commitdiff \| diff to current
2011-10-28	jprocter	(JAL-889) ensure annotation row is revalidated after...	blob \| commitdiff \| diff to current
2011-10-27	jprocter	(JAL-969) refactored alignmentViewport base class to...	blob \| commitdiff \| diff to current
2011-10-27	jprocter	(JAL-967) ensure annotation panel is rendered with...	blob \| commitdiff \| diff to current
2011-10-14	jprocter	(JAL-958) - normalised sequence logo for applet	blob \| commitdiff \| diff to current
2011-10-10	jprocter	update author list in license for (JAL-826)	blob \| commitdiff \| diff to current
2011-09-27	jprocter	apply version 2.7 copyright	blob \| commitdiff \| diff to current
2011-06-29	jprocter	repaint image buffer resize when panel height changes...	blob \| commitdiff \| diff to current
2011-02-14	jprocter	refactored annotation panel height calculation	blob \| commitdiff \| diff to current
2011-02-04	jprocter	1.2ish awt methods	blob \| commitdiff \| diff to current
2011-02-04	jprocter	1.2ish awt methods and excluding unused code	blob \| commitdiff \| diff to current
2011-02-04	jprocter	adjustable annotation panel height and vertical scrollb...	blob \| commitdiff \| diff to current
2010-09-23	jprocter	apply jalview code style	blob \| commitdiff \| diff to current
2010-09-23	jprocter	Jalview 2.6 source licence	blob \| commitdiff \| diff to current
2010-06-04	jprocter	first patch for JAL-563 - attempt to relayout annotatio...	blob \| commitdiff \| diff to current
2010-06-03	jprocter	patch re JAL-554	blob \| commitdiff \| diff to current
2010-04-30	jprocter	jalview 2.5 release banner	blob \| commitdiff \| diff to current
2010-04-23	jprocter	ported logo rendering and label fit to column width...	blob \| commitdiff \| diff to current
2009-10-27	jprocter	fix null pointer exception in redraw for short sequence...	blob \| commitdiff \| diff to current
2009-09-03	jprocter	allow middle-button drag to change height of annotation...	blob \| commitdiff \| diff to current
2009-06-08	jprocter	apply gpl development license	blob \| commitdiff \| diff to current
2008-09-04	jprocter	merge from 2_4_Release branch	blob \| commitdiff \| diff to current
2008-08-19	jprocter	fix for arrayoutofbounds bug when secondary structure...	blob \| commitdiff \| diff to current
2008-04-21	jprocter	centrecolumnlabels format menu item and parameter added...	blob \| commitdiff \| diff to current
2007-10-26	jprocter	use new utility class for platform info	blob \| commitdiff \| diff to current
2007-08-06	jprocter	null pointer exception blocked redraw of annotation...	blob \| commitdiff \| diff to current
2007-06-18	jprocter	ensure lines are drawn from first alignment column.	blob \| commitdiff \| diff to current
2007-05-01	amwaterhouse	setVisible flag sent to EditNameDialog	blob \| commitdiff \| diff to current
2007-04-27	amwaterhouse	Prevent err when editing and overview drawing	blob \| commitdiff \| diff to current
2007-04-27	amwaterhouse	Set black if colour null	blob \| commitdiff \| diff to current
2007-04-11	amwaterhouse	Amend features/annotations in applet	blob \| commitdiff \| diff to current
2007-02-07	amwaterhouse	Formatting	blob \| commitdiff \| diff to current
2007-02-05	amwaterhouse	stop flickering annotationPanel	blob \| commitdiff \| diff to current
2007-02-05	amwaterhouse	image is panel size	blob \| commitdiff \| diff to current
2007-01-30	amwaterhouse	Draw helices correctly	blob \| commitdiff \| diff to current
2007-01-29	amwaterhouse	Dont clear graphics g before drawing the image	blob \| commitdiff \| diff to current
2006-08-21	amwaterhouse	header updated	blob \| commitdiff \| diff to current
2006-08-09	amwaterhouse	Endres check for wrap alignment	blob \| commitdiff \| diff to current
2006-08-08	amwaterhouse	Applet has hidden regions	blob \| commitdiff \| diff to current
2006-07-07	amwaterhouse	Check row.annotations is not null	blob \| commitdiff \| diff to current
2006-05-15	amwaterhouse	Brackets around orgin calculation	blob \| commitdiff \| diff to current
2006-05-02	amwaterhouse	Middle mouse to compress alignment	blob \| commitdiff \| diff to current
2006-05-01	amwaterhouse	If mac, use the fillRoundRect	blob \| commitdiff \| diff to current
2006-04-28	amwaterhouse	Helix glyphs drawn correctly	blob \| commitdiff \| diff to current
2006-03-24	amwaterhouse	1 too many in drawgraph	blob \| commitdiff \| diff to current
2006-03-16	amwaterhouse	Fix for Finn Drablos bug. Must use equals for comparing...	blob \| commitdiff \| diff to current
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