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Merge branch 'develop' into bug/JAL-4059_update_swingJS_for_JalviewJS_2_11_2_and_2_11_3
[jalview.git]
/
src
/
jalview
/
appletgui
/
TreeCanvas.java
2023-05-22
James Procter
JAL-1551 spotless
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2023-05-19
James Procter
JAL-1551 spotlessApply
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2023-05-19
James Procter
JAL-1551 spotlessApply
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2023-02-23
James Procter
JAL-4134 - brutal hack to build a tree clustering colum...
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2023-02-23
James Procter
JAL-4134 - refactor tree calculation code to work with...
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diff to current
2022-03-08
Jim Procter
JAL-3438 spotless for 2.11.2.0
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diff to current
2018-10-09
Jim Procter
JAL-3127 pass reference to AlignViewportI when creating...
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diff to current
2017-10-03
gmungoc
JAL-2738 copy to spikes/mungo
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diff to current
2017-08-16
Jim Procter
JAL-2418 source formatting
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2017-06-09
gmungoc
JAL-2446 merged to spike branch
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diff to current
2017-06-05
Jim Procter
JAL-2590 patch for rendering eggnog trees with polytomi...
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diff to current
2017-03-06
gmungoc
JAL-2428 separate TreeModel from TreeBuilder/NJTree...
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2017-02-23
gmungoc
JAL-2403 JAL-1483 changes to ScoreModelI hierarchy...
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2017-01-31
gmungoc
JAL-2371 rename global/viewportColourScheme to residueS...
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2017-01-04
gmungoc
JAL-2371 CollectionColourScheme wraps ColourSchemeI
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2016-12-16
gmungoc
JAL-2360 getColour() renamed to getColourScheme(),...
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diff to current
2016-12-16
gmungoc
JAL-2360 refactoring for JalviewColourScheme enum,
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diff to current
2016-11-02
gmungoc
JAL-98 JAL-1854 encapsulate 'magic number' threshold...
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2016-10-25
Jim Procter
JAL-2089 patch broken merge to master for Release 2...
releases/Release_2_10_0_Branch
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2016-10-06
Jim Procter
JAL-2089 Merge branch releases/Release_2_10_Branch...
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2016-10-05
Jim Procter
JAL-2189 source formatting
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2016-09-22
gmungoc
JAL-1421 typed ResidueProperties.propHash; JAL-2176...
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2016-09-01
gmungoc
JAL-1421 add generics to NJTree, refactor recursive...
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2015-10-16
Jim Procter
JAL-1925 update source version in license
Release_2_9_0b2
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2015-10-08
Jim Procter
JAL-1894 update year/version in copyright
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2015-09-10
Jim Procter
JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...
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2015-04-08
gmungoc
JAL-1691 applet SplitFrame scrolling; pull up of 5...
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2015-03-26
gmungoc
Merge develop to Release_2_8_3_Branch
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2015-03-06
Jim Procter
JAL-1683 replace year/version strings with tokens in...
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2014-12-15
Jim Procter
JAL-1620 version bump and release notes
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2014-06-06
Jim Procter
JAL-1517 fix copyright for 2.8.2
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2014-06-05
Jim Procter
JAL-1517 update copyright to version 2.8.2
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2014-05-22
Jim Procter
JAL-1503 update version in GPL header
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2014-02-03
Jim Procter
Merge branch 'Release_2_8_0b1_Branch' into try_r20b1_merge
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2014-01-29
Jim Procter
JAL-1432 updated copyright notices
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2013-10-07
Jim Procter
JAL-1385 JAL-535 refactor sequence colour settings...
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2012-10-22
jprocter
Jalview 2.8 Source Header
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2012-10-03
jprocter
formatting
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2012-05-31
jprocter
formatting
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2012-05-30
jprocter
JAL-1114 - refactor methods handling Vectors and Hashta...
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diff to current
2011-10-27
jprocter
(JAL-969) refactored alignmentViewport base class to...
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2011-10-21
jprocter
Refactored alignment viewport to use common base, exten...
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2011-10-10
jprocter
update author list in license for (JAL-826)
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2011-09-27
jprocter
apply version 2.7 copyright
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2011-07-22
jprocter
fix NPE when annotation colourgradient is applied
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2011-02-04
jprocter
group associated annotation and logos JAL-516 JAL-759
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2011-01-12
jprocter
javascript callback for selection, mousover, and functi...
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2010-09-23
jprocter
apply jalview code style
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2010-09-23
jprocter
Jalview 2.6 source licence
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2010-04-30
jprocter
jalview 2.5 release banner
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2010-04-23
jprocter
fix for bug #62456
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2009-06-08
jprocter
apply gpl development license
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2008-09-04
jprocter
merge from 2_4_Release branch
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2008-07-18
jprocter
Sequence label colour stored for each sequence group
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2007-10-27
jprocter
fixed bootstrap value rendering to occur only when...
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2007-09-06
jprocter
fixes bootstrap bug noted by Chunlong Chen in email...
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2007-02-07
amwaterhouse
Formatting
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2007-01-31
amwaterhouse
Unique name for new group and treegroup
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2007-01-23
amwaterhouse
Hidden representatives moved from sequence to viewport
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2007-01-17
amwaterhouse
Fit to Window bug fixed
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2006-11-14
amwaterhouse
Commands, history, consensus, refresh updated
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2006-11-13
amwaterhouse
Colours in viewport
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2006-09-18
amwaterhouse
click node to select sequences
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2006-08-21
amwaterhouse
header updated
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2006-07-12
amwaterhouse
sequences are private in SequenceGroup
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2005-12-06
amwaterhouse
after merge
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2005-09-30
amwaterhouse
Remove redundancy in Eclipse
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2005-09-28
amwaterhouse
Wrap alignment with annotations
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2005-09-20
amwaterhouse
Format label left align
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2005-09-08
amwaterhouse
Load in a thread
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2005-08-30
amwaterhouse
Set user colours same as global
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2005-08-24
amwaterhouse
Set new group width-1
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2005-08-23
amwaterhouse
End res of selection group corrected
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2005-08-22
amwaterhouse
Check for null colour
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2005-08-22
amwaterhouse
Conservation colour scheme is no more
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2005-06-16
amwaterhouse
dont add sequence twice to new group
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2005-06-13
amwaterhouse
PaintRefresh changed
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2005-06-08
amwaterhouse
recalc group conserve
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2005-06-08
amwaterhouse
Formatted source
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2005-06-08
amwaterhouse
GPL license added
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2005-05-20
jprocter
added tree node property for sequence placeholders.
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2005-05-04
amwaterhouse
Applet files
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