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Merge branch 'develop' into trial_merge/JAL-1950
[jalview.git]
/
src
/
jalview
/
gui
/
PCAPanel.java
2017-08-16
Jim Procter
JAL-2418 source formatting
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commitdiff
2017-05-05
kiramt
Merge remote-tracking branch 'origin/develop' into
features/JAL-2388hiddencolumnschanges
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diff to current
2017-05-04
Jim Procter
Merge branch 'features/JAL-2393customMatrices' into...
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diff to current
2017-05-02
gmungoc
JAL-2499 JAL-2403 push 'configure for view' inside...
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diff to current
2017-04-24
kiramt
JAL-2388 Hidden cols separated from column selection...
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diff to current
2017-04-12
gmungoc
JAL-1632 remove unused check for sequences aligned
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diff to current
2017-04-10
tcofoegbu
JAL-2473 added improvement to apply default / custom...
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diff to current
2017-04-07
gmungoc
JAL-2393 code tidying for review comments
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diff to current
2017-03-27
gmungoc
JAL-2416 add score model description field for tooltip...
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diff to current
2017-02-27
gmungoc
JAL-1632 dialog to calculate either Tree or PCA
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diff to current
2017-02-27
gmungoc
JAL-1632 add score model params to PCAModel and PCA...
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2017-02-23
gmungoc
JAL-2403 JAL-1483 changes to ScoreModelI hierarchy...
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2017-02-20
gmungoc
JAL-2403 ScoreModelI now DistanceModelI, ScoreMatrix...
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2017-02-13
gmungoc
JAL-1632 JAL-2416 load score matrices from file, as...
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2017-01-17
gmungoc
Merge branch 'develop' into features/JAL-2360colourSche...
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2017-01-12
gmungoc
JAL-2379 null references to PCA model when panel is...
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diff to current
2016-12-12
gmungoc
JAL-1544 backgroud -> background
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2016-11-24
tcofoegbu
JAL-2326 updated references of JOptionPane to JvOptionPane
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diff to current
2016-10-25
Jim Procter
JAL-2089 patch broken merge to master for Release 2...
releases/Release_2_10_0_Branch
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diff to current
2016-10-06
Jim Procter
JAL-2089 Merge branch releases/Release_2_10_Branch...
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diff to current
2016-08-24
gmungoc
JAL-1424 corrected Message bundle lookup key
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diff to current
2016-06-19
Jim Procter
JAL-2110 JAL-2131 JAL-1765 remove reference to jalview...
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diff to current
2016-02-09
tcofoegbu
JAL-1975 updated image export pipeline to produce more...
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diff to current
2015-10-16
Jim Procter
JAL-1925 update source version in license
Release_2_9_0b2
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diff to current
2015-10-08
Jim Procter
JAL-1894 update year/version in copyright
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diff to current
2015-09-10
Jim Procter
JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...
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diff to current
2015-09-10
Jim Procter
JAL-1645 source formatting and organise imports
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diff to current
2015-05-29
gmungoc
JAL-1753 declare field with interface type; check for...
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diff to current
2015-05-29
gmungoc
JAL-1753 duplicated code refactored to new class Progre...
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2015-03-26
gmungoc
Merge develop to Release_2_8_3_Branch
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2015-03-06
Jim Procter
JAL-1683 replace year/version strings with tokens in...
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diff to current
2014-12-15
Jim Procter
JAL-1620 version bump and release notes
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2014-11-12
Charles Ofoegbu
Added support for SVG Export
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2014-09-23
darolmar
JAL-1355
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2014-09-19
darolmar
JAL-1355
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commitdiff
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diff to current
2014-06-06
Jim Procter
JAL-1517 source formatting
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diff to current
2014-06-06
Jim Procter
JAL-1517 fix copyright for 2.8.2
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diff to current
2014-06-05
Jim Procter
JAL-1517 update copyright to version 2.8.2
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2014-06-03
Jim Procter
JAL-1473 exclude score models not compatible with PCA...
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2014-05-22
Jim Procter
JAL-1503 update version in GPL header
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2014-04-21
Jim Procter
JAL-1473 define defaults for DNA/Protein PCA calculation
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2014-04-21
Jim Procter
JAL-1485 JAL-1483 show i18n key for different available...
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diff to current
2014-04-21
Jim Procter
JAL-1473 show available score matrices for use in PCA...
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diff to current
2014-02-03
Jim Procter
Merge branch 'Release_2_8_1_Branch_i18n' into try_r20b1...
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2014-02-03
Jim Procter
Merge branch 'Release_2_8_0b1_Branch' into try_r20b1_merge
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2014-01-29
Jim Procter
JAL-1432 updated copyright notices
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2013-12-25
darolmar
JAL-1355 (basic i18n support)
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diff to current
2013-08-14
Jim Procter
JAL-1354 replacement of bare strings in GUI dialogs...
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diff to current
2012-11-08
jprocter
tidy imports
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commitdiff
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diff to current
2012-10-22
jprocter
Jalview 2.8 Source Header
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diff to current
2012-10-03
jprocter
formatting
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commitdiff
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diff to current
2012-09-25
jprocter
JAL-1031 JAL-1032 if selection is non-null but empty...
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diff to current
2012-06-15
jprocter
formatting
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diff to current
2012-06-15
jprocter
JAL-1125 option to switch between Jalview and SeqSpace...
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diff to current
2012-06-15
jprocter
JAL-535 refactored core code from PCA viewer to viewmodel.
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diff to current
2012-06-15
jprocter
JAL-1120 patch for desktop
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2012-06-15
jprocter
patch for JAL-1121 - reset button and slightly wider...
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2012-06-15
jprocter
Merge branch 'JAL-1013_pca_rna_dna' into develop
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diff to current
2011-12-14
jprocter
JAL-1033, JAL-1013 - ensure pca window shown only after...
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diff to current
2011-12-14
jprocter
JAL-1013 - rename nucleotide and ensure current calcula...
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2011-12-13
jprocter
JAL-1013 - toy menu to switch between nucleotide and...
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diff to current
2011-12-08
jprocter
(JAL-1013) specify sequence type to ensure PCA calculat...
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diff to current
2011-10-27
jprocter
(JAL-969) refactored alignmentViewport base class to...
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diff to current
2011-10-10
jprocter
update author list in license for (JAL-826)
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diff to current
2011-09-27
jprocter
apply version 2.7 copyright
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diff to current
2010-09-23
jprocter
apply jalview code style
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diff to current
2010-09-23
jprocter
Jalview 2.6 source licence
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diff to current
2010-08-18
jprocter
JAL-617 - new menu items for exporting current view...
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diff to current
2010-04-30
jprocter
jalview 2.5 release banner
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diff to current
2009-06-08
jprocter
apply gpl development license
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2008-09-04
jprocter
merge from 2_4_Release branch
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diff to current
2008-08-13
jprocter
check for null viewport on dataset recovery
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diff to current
2008-08-13
jprocter
ensure input data can be recovered for tree and PCA...
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diff to current
2007-02-07
amwaterhouse
Formatting
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diff to current
2006-11-27
amwaterhouse
Some reason final radioButtons added to ButtonGroups...
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diff to current
2006-11-23
amwaterhouse
Associate PCA with multiple views
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diff to current
2006-11-07
amwaterhouse
Add keylistener to InternalFrame, not canvas
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2006-10-05
amwaterhouse
Multiple Views
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2006-08-21
amwaterhouse
header updated
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2006-08-08
amwaterhouse
Capitals
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diff to current
2006-08-04
jprocter
recover original data for tree and pca as alignment...
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2006-07-21
amwaterhouse
getViewAsString can ignore sequenceGroup
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2006-07-19
amwaterhouse
Original tree data output in PFAM format
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2006-07-18
amwaterhouse
Use selection area with hidden columns in calculations
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2006-07-12
amwaterhouse
sequences are private in SequenceGroup
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2005-12-06
amwaterhouse
After merge
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2005-09-23
amwaterhouse
Now an InternalFrame with menus
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2005-09-21
amwaterhouse
Sequences must be aligned before PCA
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2005-09-20
amwaterhouse
Use selectionGroup to find chosen sequences
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2005-09-14
amwaterhouse
System.gc after outofmemory
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2005-09-13
amwaterhouse
Warn if out of memory
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2005-09-08
amwaterhouse
Init PCA in thread
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diff to current
2005-06-30
amwaterhouse
Formatting changes
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2005-06-08
amwaterhouse
Formatted source
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2005-06-08
amwaterhouse
GPL license added
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2005-05-25
amwaterhouse
selectiongroup could be null
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2005-03-15
amwaterhouse
selection removed, now SelectionGroup does same job...
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2004-12-01
amwaterhouse
Brackets moved
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diff to current
2004-11-04
amwaterhouse
Only 4 or more sequences allowed for PCA
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2004-11-02
amwaterhouse
Jalview Imported Sources
start
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diff to current