| 2023-08-10 |
Ben Soares | JAL-629 Change all stdout and stderr output to use... |
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| 2023-07-20 |
James Procter | JAL-3855 auto select clusters and fix up colouring... |
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| 2023-06-07 |
James Procter | JAL-4195 add exception handling for all image output... |
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| 2023-05-29 |
James Procter | JAL-4190 - escape clears selected nodes |
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| 2023-05-22 |
James Procter | JAL-1551 spotless |
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| 2023-05-19 |
James Procter | JAL-1551 spotlessApply |
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| 2023-05-19 |
James Procter | JAL-1551 spotlessApply |
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| 2023-03-17 |
James Procter | JAL-4134 store/restore Newick tree for PAE annotation row |
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| 2023-02-27 |
James Procter | JAL-4134 display tree for columns - selecting an intern... |
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| 2023-02-23 |
James Procter | JAL-4134 - refactor tree calculation code to work with... |
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| 2023-01-06 |
Ben Soares | JAL-3416 remove a missed panel titlebar icon in TreePanel |
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| 2022-11-09 |
Ben Soares | JAL-3416 Remove all JFrame/JInternalFrame icons (set... |
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| 2022-11-03 |
Ben Soares | JAL-3416 File Chooser iconified, JvOptionPanes iconifie... |
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| 2022-03-08 |
Jim Procter | JAL-3438 spotless for 2.11.2.0 |
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| 2022-02-11 |
Jim Procter | JAL-3949 - refactor logging from jalview.bin.Cache... |
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| 2022-02-11 |
Ben Soares | JAL-3949 Complete new abstracted logging framework... |
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| 2021-09-21 |
Ben Soares | JAL-3691 automatic insertion of Locale.ROOT to toUpperC... |
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| 2020-08-13 |
gmungoc | JAL-3597 additional references nulled, bug in test... |
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| 2020-07-14 |
gmungoc | JAL-3597 additional references nulled, bug in test... |
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| 2019-03-13 |
gmungoc | Merge branch 'develop' into trialMerge |
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| 2019-01-26 |
hansonr | Jalview.isJS() --> Platform.isJS(), DBRefEntry[] -... |
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| 2018-12-19 |
Jim Procter | Merge branch 'features/JAL-1767pcaInProject' into bug... |
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| 2018-12-06 |
Ben Soares | JAL-3130 incorporating feature/JAL-3063jaxbNoCastor... |
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| 2018-10-17 |
Jim Procter | Merge branch 'feature/JAL-3063JAXB' into Jalview-BH... |
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| 2018-09-14 |
gmungoc | JAL-3116 parse EMBL XML with JAXB (todo: update unit... |
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| 2018-07-23 |
gmungoc | JAL-3048 all image export (alignment, tree, PCA, Jmol... |
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| 2018-07-20 |
gmungoc | JAL-3048 JalviewJS compliant use of LineartOptions... |
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| 2018-07-17 |
gmungoc | JAL-3068 LineartOptions for EPS/HTML/SVG, new preferenc... task/JAL-3068lineartDialog |
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| 2018-06-28 |
Jim Procter | JAL-3048 TODOs for refactoring JalviewFileChooser pattern |
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| 2018-04-26 |
gmungoc | JAL-2962 remove Change Parameters menu from PCA panel |
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| 2017-10-27 |
gmungoc | JAL-1793 spike branch updated to latest |
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| 2017-10-26 |
Jim Procter | JAL-2488 patch causes of NPE during testStoreAndRecover... |
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| 2017-10-26 |
Jim Procter | Merge branch 'feature/JAL-2488finalize' into develop |
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| 2017-10-24 |
gmungoc | JAL-2738 update spike branch with latest |
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| 2017-10-12 |
Jim Procter | JAL-2773 add new flag to paintAlignment(updateOverview... features/JAL-2773_dontalwaysrecolourstructureonrepaintofoverview |
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| 2017-10-03 |
gmungoc | JAL-2738 copy to spikes/mungo |
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| 2017-09-01 |
gmungoc | JAL-2216 remove alignment listener when Tree Panel... |
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| 2017-08-21 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList features/JAL-2446NCList |
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| 2017-08-16 |
Jim Procter | JAL-2418 source formatting |
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| 2017-06-09 |
gmungoc | JAL-2446 merged to spike branch |
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| 2017-05-18 |
gmungoc | JAL-2490 lookup sequence features for "labelClass" |
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| 2017-05-05 |
kiramt | Merge remote-tracking branch 'origin/develop' into features/JAL-2388hiddencolumnschanges |
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| 2017-05-02 |
gmungoc | JAL-2499 inlined two 1-line methods |
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| 2017-05-02 |
gmungoc | JAL-2499 JAL-2403 push 'configure for view' inside... |
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| 2017-04-24 |
kiramt | JAL-2388 Hidden cols separated from column selection... |
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| 2017-04-21 |
gmungoc | JAL-2423 tweak tree panel title, add Spanish text |
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| 2017-03-24 |
gmungoc | JAL-2428 simplify TreeModel constructors, add getOrigin... |
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| 2017-03-06 |
gmungoc | JAL-2428 separate TreeModel from TreeBuilder/NJTree... |
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| 2017-02-27 |
gmungoc | JAL-1632 similarity options on TreeChooser panel affect... |
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| 2017-02-27 |
gmungoc | JAL-1632 refactored NJTree constructor to include Simil... |
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| 2017-02-27 |
gmungoc | JAL-2403 JAL-838 remove unused methods and unneeded... |
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| 2017-02-23 |
gmungoc | JAL-2403 JAL-1483 changes to ScoreModelI hierarchy... |
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| 2017-02-20 |
gmungoc | JAL-2403 ScoreModelI now DistanceModelI, ScoreMatrix... |
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| 2017-02-17 |
gmungoc | JAL-2423 refactored method to build panel title for... |
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| 2017-02-17 |
gmungoc | JAL-2403 constants for "NJ", "AV" |
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| 2017-02-13 |
gmungoc | JAL-1632 JAL-2416 load score matrices from file, as... |
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| 2017-01-25 |
gmungoc | JAL-2344 push Cache.getProperty("LAST_DIRECTORY") insid... |
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| 2016-12-07 |
gmungoc | JAL-2344 handle null format, simplify JalviewFileChoose... |
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| 2016-10-25 |
Jim Procter | JAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch |
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| 2016-10-06 |
Jim Procter | JAL-2089 Merge branch releases/Release_2_10_Branch... |
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| 2016-08-30 |
gmungoc | Merge branch 'develop' into features/filetypeEnum |
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| 2016-06-19 |
Jim Procter | JAL-2110 JAL-2131 JAL-1765 remove reference to jalview... |
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| 2016-05-26 |
tcofoegbu | JAL-1911 improvement to bugfix - do not save i18n text... |
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| 2016-05-26 |
tcofoegbu | JAL-1911 bugfix - do not save i18n text in preference... |
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| 2015-10-16 |
Jim Procter | JAL-1925 update source version in license Release_2_9_0b2 |
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| 2015-10-15 |
tcofoegbu | JAL-1479 refactored SequenceI interface - changed getDB... |
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| 2015-10-08 |
Jim Procter | JAL-1894 update year/version in copyright |
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| 2015-09-10 |
Jim Procter | JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin... |
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| 2015-09-10 |
Jim Procter | JAL-1645 source formatting and organise imports |
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| 2015-09-06 |
Jim Procter | JAL-1645 JAL-1355 UI/i18n: added missing messages,... |
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| 2015-03-26 |
gmungoc | Merge develop to Release_2_8_3_Branch |
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| 2015-03-06 |
Jim Procter | JAL-1683 replace year/version strings with tokens in... |
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| 2015-03-06 |
Jim Procter | Merge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e... |
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| 2015-01-07 |
Jim Procter | JAL-1483 refactor NJTree constructor to allow preconfig... |
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| 2015-01-07 |
Jim Procter | JAL-1483 organise imports |
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| 2014-12-15 |
Jim Procter | JAL-1620 version bump and release notes |
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| 2014-09-23 |
darolmar | JAL-1355 |
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| 2014-06-06 |
Jim Procter | JAL-1517 source formatting |
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| 2014-06-06 |
Jim Procter | JAL-1517 fix copyright for 2.8.2 |
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| 2014-06-05 |
Jim Procter | JAL-1517 update copyright to version 2.8.2 |
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| 2014-05-22 |
Jim Procter | JAL-1503 update version in GPL header |
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| 2014-02-03 |
Jim Procter | Merge branch 'Release_2_8_1_Branch_i18n' into try_r20b1... |
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| 2014-01-29 |
Jim Procter | JAL-1432 updated copyright notices |
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| 2013-12-25 |
darolmar | JAL-1355 (basic i18n support) |
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| 2012-10-22 |
jprocter | Jalview 2.8 Source Header |
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| 2012-10-03 |
jprocter | formatting |
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| 2012-09-27 |
jprocter | JAL-1030 patch typo |
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| 2012-09-25 |
jprocter | JAL-1031 JAL-1032 if selection is non-null but empty... |
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| 2012-08-03 |
jprocter | JAL-1115 reference to List<SequenceI> passed in 'alignm... |
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| 2011-10-27 |
jprocter | (JAL-969) refactored alignmentViewport base class to... |
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| 2011-10-10 |
jprocter | update author list in license for (JAL-826) |
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| 2011-09-27 |
jprocter | apply version 2.7 copyright |
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| 2011-09-16 |
jprocter | JAL-468 JAL-936 sort alignment by tree and autosort... |
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| 2010-09-23 |
jprocter | apply jalview code style |
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| 2010-09-23 |
jprocter | Jalview 2.6 source licence |
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| 2010-08-18 |
jprocter | JAL-612 - catch hidden OOM related to filling in cut... |
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| 2010-04-30 |
jprocter | jalview 2.5 release banner |
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| 2010-04-29 |
jprocter | property change race condition (bug 0062693) and isAlig... |
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| 2009-06-08 |
jprocter | apply gpl development license |
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| 2009-06-01 |
jprocter | prototype function for relabelling treenodes with diffe... |
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git://source.jalview.org / jalview.git / history