Merge branch 'features/mchmmer' into features/mchmmer_merge_JAL-1950
[jalview.git] / src / jalview / bin / Cache.java
2018-03-23 gmungocJAL-2937 unused field removed
2018-03-20 gmungocMerge branch 'develop' into features/mchmmer
2018-03-16 gmungocMerge branch 'develop' into trialMerge
2018-03-13 gmungocJAL-2913 use FIGURE_FIXEDIDWIDTH (not FIGURE_USERIDWIDTH)
2018-03-07 gmungocJAL-2913 use FIGURE_USERIDWIDTH for fixed id width...
2018-01-16 gmungocJAL-1270 JAL-2885 clear properties before load
2017-10-03 gmungocJAL-2738 copy to spikes/mungo
2017-08-18 TZVanaaltenMerge branch 'develop' into features/hmmer
2017-08-16 Jim ProcterJAL-2418 source formatting
2017-08-08 TZVanaaltenJAL-2629 add ability to select hmmer binaries folder
2017-06-09 gmungocJAL-2446 merged to spike branch
2017-03-24 Jim ProcterJAL-2360 fix applet build by separating castor XML...
2017-02-08 kiramtMerge remote-tracking branch 'origin/develop' into...
2017-02-08 Jim ProcterJAL-2366 updated default URL to jalview.org/services...
2017-01-26 kiramtJAL-2316 Updated to use identifiers jalview service
2016-12-23 gmungocJAL-2360 removed UserDefinedColours.userColourSchemes
2016-12-16 gmungocJAL-2360 refactoring for JalviewColourScheme enum,
2016-12-09 kiramtJAL-2316 Unit test updates and associated minor changes...
2016-12-07 kiramtJAL-2316 Restructure identifiers.org download
2016-10-25 Jim ProcterJAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch
2016-10-06 Jim ProcterJAL-2089 Merge branch releases/Release_2_10_Branch...
2016-10-05 Jim ProcterJAL-2189 source formatting
2016-09-23 tcofoegbuJAL-2164 JAL-1919 fixed failed revert commit
2016-09-13 tcofoegbuJAL-2164 JAL-1919 disabled PDB file parser configuratio...
2016-09-13 tcofoegbuRevert "JAL-2164 JAL-1919 disabled and removed PDB...
2016-09-13 tcofoegbuJAL-2164 JAL-1919 disabled and removed PDB file parser...
2016-09-08 tcofoegbuJAL-2164 renamed 'DEFAULT_STRUCTURE_FORMAT' property...
2016-08-22 gmungocJAL-1448 corrected for backwards compatibility for...
2016-08-05 gmungocJAL-1448 always use UK locale for formatted date properties
2016-07-21 tcofoegbuResolve merge conflict for StructureImportSettings
2016-07-21 tcofoegbuJAL-2148 fix to heuristically determine chain terminati...
2016-07-21 Jim ProcterMerge branch 'apifix/JAL-1926_JAL-2106' into develop
2016-07-20 Jim ProcterJAL-1926 JAL-2106 don’t use PDB database constant as...
2016-07-19 tcofoegbuJAL-1919 set default structure file format to mmCIF...
2016-07-08 tcofoegbuJAL-1919 Fixed failing tests, enabled HETATM processing...
2016-06-30 tcofoegbuJAL-1919 updated PDBSequenceFetcherTest and JMol parser...
2016-05-26 tcofoegbuJAL-1911 bugfix - do not save i18n text in preference...
2016-03-24 tcofoegbuJAL-1919 set DEFUALT_STRUCTURE_FORMAT to PDB
2016-03-23 tcofoegbuJAL-2009 added programmatic custom feature setting...
2016-03-22 tcofoegbuJAL-1919 code improvement to make PDB sequence fetcher...
2016-01-26 tcofoegbuJAL-1999 JAL-1479 implemented configurable fail-safe...
2015-11-25 tcofoegbuJAL-1479 applet build debug
2015-11-25 tcofoegbuJAL-1479 bugfix after decoupling SIFTS preference settings
2015-10-16 Jim ProcterJAL-1925 update source version in license Release_2_9_0b2
2015-10-08 Jim ProcterJAL-1894 update year/version in copyright
2015-09-22 Jim ProcterMerge branch 'develop' into Release_2_9_0b1_Branch
2015-09-16 gmungocJAL-1882 variable renamed to avoid confusion with membe...
2015-09-10 Jim ProcterJAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...
2015-09-10 Jim ProcterJAL-1645 source formatting and organise imports
2015-08-11 tcofoegbuadd ability to launch jalview from exported html +...
2015-03-06 Jim ProcterJAL-1683 replace year/version strings with tokens in...
2014-12-22 Jim ProcterMerge: 497958b 68dcaa7
2014-12-15 Jim ProcterJAL-1620 version bump and release notes
2014-11-28 Jim ProcterJAL-1522 output installation type to stdout
2014-11-28 Jim ProcterJAL-1522 remove build/deployment details imported from...
2014-11-19 gmungocJAL-1342 new command-line parameter -jabaws <URL>
2014-11-17 gmungocJAL-1528 new Preference CHIMERA_PATH (Preferences ...
2014-11-13 gmungocJAL-1528 new Preference CHIMERA_PATH (Preferences ...
2014-11-05 gmungocJAL-1152 new Structure tab on Preferences for SS deriva...
2014-11-03 gmungocJAL-1152 annotation sorting preferences and help docume...
2014-10-31 gmungocJAL-1152 menu tweaks plus new option to put Autocalc...
2014-10-30 gmungocJAL-1152 with sticky annotation sort order that updates...
2014-06-06 Jim ProcterJAL-1519 - tidy build properties management code
2014-06-06 Jim ProcterJAL-1517 fix copyright for 2.8.2
2014-06-05 Jim ProcterJAL-1517 update copyright to version 2.8.2
2014-05-22 Jim ProcterJAL-1503 update version in GPL header
2014-02-21 Jim ProcterJAL-1448 reinstate non-locale sensitive code for readin...
2014-02-03 Jim ProcterMerge branch 'Release_2_8_0b1_Branch' into try_r20b1_merge
2014-01-29 Jim ProcterJAL-1432 updated copyright notices
2013-08-30 darolmari18n date/time handling
2012-10-22 jprocterJalview 2.8 Source Header
2012-10-03 jprocterformatting
2012-10-03 jprocterJAL-1026 - insert a sensible default for proxy so Jalvi...
2012-03-30 jprocterMerge branch 'JAL-972-dasobert-to-jdas' into JAL-972...
2012-02-29 jprocterJAL-972 - refactored local source builder to registry...
2012-02-13 jprocterremove dead imports
2012-02-13 jprocterremoved all dasobert code and begun to replace with...
2011-11-09 jprocterMerge branch 'JAL-986_idwidthprefs' into develop
2011-11-09 jprocter(JAL-985,JAL-986) preferences documentation
2011-11-09 jprocter(JAL-986) getter for integer user preference properties
2011-10-11 jprocternormalised logo rendering (JAL-958)
2011-10-10 jprocterupdate author list in license for (JAL-826)
2011-09-27 jprocteruse jalview properties preference to enable RSBS editor...
2011-09-27 jprocterapply version 2.7 copyright
2011-09-22 jprocterjalview rss reader based on jswingreader (JAL-943)
2011-09-16 jprocterJAL-940 - removed legacy service options from preferenc...
2011-07-28 jprocterrefer to local default setting for proxy when connecting to
2011-07-25 jprocteruse proper encoding for storing colour as user preferen...
2011-07-22 jproctermethod to get a user default colour (JAL-234)
2011-04-08 jprocterimported properties via -props should never be overwritten
2011-02-04 jprocterBalascz reported problems - jalview tries to write...
2011-02-04 jprocterJAL-761
2010-11-04 jproctermade ws warning dialog optional, and fixed its wording...
2010-09-23 jprocterapply jalview code style
2010-09-23 jprocterJalview 2.6 source licence
2010-06-08 jprocterfollowSelections flag now set via user preferences...
2010-05-14 jprocterallow initLogger to be called multiple times
2010-04-30 jprocterjalview 2.5 release banner
2010-04-14 jprocterprofile visualizations are now logos
2010-03-30 jproctergroup autoannotation and consensus display settings
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