jalview.git
11 min ago features/JAL-3895_alphafoldcolours
83 min ago releases/Release_2_11_2_Branch
84 min ago develop
2 days ago features/JAL-3417_sdppred_calcs
2 days ago bug/JAL-4072_zip_slip_vulnerability_in_getdown
10 days ago bug/JAL-1988_JAL-3772_improved_quit_handling
2 weeks ago features/JAL-4071_visibleFeaturesCounter
2 weeks ago features/JAL-518_justify_seqs_in_region
3 weeks ago features/JAL-4061_and_JAL-4062_findselectfeatures
5 weeks ago improvement/JAL-4064_M1_native_JRE_bundled_in_DMG
7 weeks ago task/JAL-4059_updateJmolandSwingJS
8 weeks ago master
2 months ago spike/JAL-4055_retire_JDesktop
2 months ago patch/JAL-4036_uniprot_fts_legacy_endpoint
2 months ago features/JAL-4034_improve_3dbeacons_button_and_ux
2 months ago spike/JAL-4047/JAL-4048_columns_in_sequenceID
3 months ago improvement/JAL-1988+JAL-3416_Java8_macOS_APQHandlers_and_FlatLaF_option
3 months ago features/r2_11_2_alphafold/JAL-2349_JAL-3855
3 months ago spike/GFF_as_first_class_filetype_improvements_JAL-4028/placeholders_get_additional_sequence_data
3 months ago JAL-3416_different_look_and_feel_on_linux
3 months ago patch/JAL-4024_jumpScrollHang
4 months ago improvement/JAL-4023_snotation_for_trees
4 months ago features/JAL-1953_Archeopteryx_with_Jalview_2_11_2
4 months ago alpha/Jalview_212_test_merged_buildgradle
4 months ago issues/JAL-3553+JAL-3978+JAL-3989+JAL-4004_merged_with_develop
4 months ago improvement/JAL-4014_gecos_colour_schemes
4 months ago patch/JAL-4008_jabaws_2_2_1_patch
5 months ago improvement/JAL-3393_make_DMG_background_image_relative_path_in_DS_Store
5 months ago task/JAL-3991_check_actual_JAVA_VERSION_against_build_properties_in_application_startup
5 months ago bug/JAL-3365_failing_per_sequence_ss_tests
5 months ago bug/JAL-3997_NPE_in_wrapped_mode
5 months ago bug/JAL-3365_extendedDSSP_via_stockholm
5 months ago bug/JAL-3288_override_all_JInternalFrame_with_Classic_JInternalFrame
5 months ago JAL-3878_ws-overhaul-3
6 months ago feature/JAL-3851_rest_api_for_genome_browser_updated_with_develop
6 months ago improvement/JAL-3847_add_dependencies_reported_by_gradle_7
6 months ago patch/JAL-3976_3dbeaconsnull
6 months ago feature/JAL-3982_mouseover_highlighting_viaJAL-3860
6 months ago bug/JAL-3980_JAL-3981_tooltips_sequence_details
6 months ago spike/JAL-3781_2d_scaling
6 months ago bug/JAL-360+JAL-3975_keyboard_input_lost_after_dialog
6 months ago bug/JAL-3973_source_tarball_not_building
6 months ago bug/JAL-3972_VAqua_for_Java11
6 months ago spike/try_spotless_JAL-3438
7 months ago bug/JAL-3103_browser_launcher_problems_macos_and_linux
7 months ago benreview/JAL-3691_for_2_11_2_getdownrebuilds
7 months ago bug/JAL-3962_awt_dll_problem
7 months ago improvement/JAL-3830_install4j9_macos_setup_application
7 months ago improvement/JAL-3594_BG_and_UoD_logos_added
7 months ago feature/r2_11_2/JAL-3808_gff2_exonerate
7 months ago JAL-3954_ebi_phmmer
7 months ago update/JAL-3949_jalview_bin_Console_to_cure_sanity_even_more
7 months ago feature/JAL-1713_overviewInProject
7 months ago bug/JAL-3785autoOverviewTitle
7 months ago features/JAL-722alignmentProperties
8 months ago bug/JAL-3806_without_shared_DS_for_2_11_2
8 months ago improvement/JAL-3420_match_jvl_icon_with_new_website_jvl_icon
8 months ago merge/develop_task/JAL-3763_newDatasetForCds
8 months ago releases/Release_2_11_1_Branch
8 months ago patch/r2_11_1_branch_JAL-3703_closing_files
8 months ago bug/JAL-3703_saving_a_file_in_Windows_10_fails
9 months ago alpha/JAL-3066_Jalview_212_slivka-integration
9 months ago critical/JAL-3933_log4j_update_for_develop_branch
9 months ago task/JAL-3934_update_log4j_again
9 months ago spike/JAL-3753_helphtmldupes
9 months ago critical/JAL-3933_log4shell_mitigation
10 months ago task/JAL-3911_getdown_improvements
10 months ago JAL-3878-ws-overhaul
10 months ago JAL-3927_ws_preferences_dialog_fix
10 months ago features/r2_11_2/JAL-3922_jmolSelectionHighlighting
10 months ago JAL-3878_web_services_overhaul
11 months ago improvement/JAL-3594_added_subtle_grey_tesselating_logos_to_getdown_splashscreen
11 months ago bug/r2_11_2/JAL-3904_structureviewermenu
12 months ago alpha/JAL-3899_deuniquify_refactor
12 months ago features/JAL-2909_bamImport_2_11_2
12 months ago merge/develop_JAL-3725
12 months ago improvement/JAL-3594_logos_for_jalview_test
12 months ago bug/JAL-3885_sequence_fetched_not_displaying_PFAM_Seed
12 months ago features/r2_11_2/JAL-3829_3dbeacons
12 months ago doc/JAL-3746_Release_2_11_2
12 months ago merge/develop_JAL-3521_minimal_build.gradle_file
12 months ago feature/JAL-1260_genbank_embl_flatfile_import_reloaded
12 months ago patch/JAL-3874_newJmolAndGradleDedup
12 months ago feature/JAL-3874_add_source_jars_to_eclipse
12 months ago task/r2_11_2/JAL-3871_Jmol_dedup
12 months ago feature/JAL-2422ChimeraX
13 months ago JAL-3866_RNAalifold-slivka-client
13 months ago feature/JAL-3851_prototype_comms_for_jbrowse2
14 months ago improvement/JAL-3848_slivka_0.8
14 months ago bug/JAL-3850_gradle_7_build_failure_no_SimpleHttpFileServerFactory
14 months ago improvement/JAL-3848_slivka_0.8_updated_jslib
14 months ago bug/JAL-3807_jpred-with-slivka
14 months ago bug/JAL-3849_aacon-parameters
15 months ago patch/JAL-3847_gradleV7andV8Patches
15 months ago patch/JAL-3840_2_11_2
15 months ago task/JAL-3594_updated--CHANNEL_cosmetics
15 months ago patch/JAL-3840_2_11_1_4
15 months ago improvement/JAL-3830_macOS_bundle_wrapper
18 months ago arnaud/develop
18 months ago bug/JAL-3633_read_proxy_settings_from_jalview_properties_in_getdown
18 months ago improvement/JAL-3503_startup_preferences
18 months ago bug/JAL-3523_cwd_not_preserved
19 months ago improvement/JAL-3826_gradle_configuration_for_intellij_idea
19 months ago bug/JAL-3806_mappingCoversSequence
19 months ago bug/JAL-3809_ws_params_dialog_fix
19 months ago patch/for2.11.2/JAL-3821_ena_rna_moltype
19 months ago patch/JAL-3821_ena_rna_moltype
19 months ago releases/Release_2_11_1_4_debianpatches
19 months ago bug/JAL-3818_jmolDeadlock
20 months ago bug/JAL-3810_annotation_ws_stopping_abruptly
20 months ago bug/JAL-3806_mappingCoversCDS_reprise
20 months ago feature/JAL-3690_callback-based-web-services
20 months ago task/JAL-3805_Remove_Uninstall_Old_Jalview_application_for_develop_branch
20 months ago task/JAL-3805_Remove_Old_Jalview_Uninstaller_application
20 months ago Jalview-JS/develop
20 months ago task/JAL-3789_configurable_j2s_file_for_headless_transpile_with_official_swingjs
20 months ago feature/JAL-3117_overviewFocusAlignment
20 months ago patch/JAL-3794_X_is_a_dna_rna_base_too
21 months ago bug/JAL-3788_autoOverviewClustal
21 months ago bug/JAL-3761_locateInFromTo
21 months ago improvement/JAL-3790_enable_copy_to_clipboard_of_getdown_splashscreen_text
21 months ago merge/Jalview-JS/develop_feature/JAL-3690_callback-based-web-services
21 months ago bug/JAL-3612_overviewFeatureOrdering
21 months ago Jalview-JS/develop_j2s_v3_2_9_j11
22 months ago spike/JAL-3690_with_patched_j2s_v3_2_9_plugin
22 months ago merge/develop_and_rebase_squashed_merge_JAL-3628+JAL-3608+JAL-3609+JAL-3541+Release_2_11_1_Branch
22 months ago bug/JAL-3751_revisited
22 months ago bug/JAL-3774_splitFrameFinder
22 months ago bug/JAL-3779setGroupProperties
22 months ago task/JAL-3521_Slimmed_down_build.gradle_for_debian
22 months ago spike/clinvar
23 months ago patch/JAL-3700_JAL-3748_JAL-3763_for_2_11_1_3
23 months ago task/JAL-3763_newDatasetForCds
23 months ago bug/JAL-3765_Find_bugs_in_21112
2 years ago Jalview-JS/bug/JAL-3762_URLparamsOverrideInfoArg
2 years ago bug/JAL-3760_protsTreatedAsNucleotides
2 years ago bug/JAL-3753_resources_duplicated_in_jalview_jar
2 years ago bug/JAL-3751overlappingCDS
2 years ago bug/JAL-3700_JAL-3748_reconstructCDSafterProteinMSA_for2_11_1_2
2 years ago bug/JAL-3700_mapSequenceSelection
2 years ago patch/JAL-3584_cherrypickto-JAL-3676_2.11.1.1
2 years ago bug/JAL-3744_read_gzip_file_in_jalviewjs
2 years ago feature/JAL-3576intervalStore_1_2
2 years ago feature/JAL-3615gzipXfam
2 years ago improvement/JAL-3280_Migrate_the_VersionChecker_service_to_build_properties
2 years ago feature/JAL-3390hideUnmappedStructure
2 years ago feature/JAL-3730ensemblPingRetries
2 years ago bug/JAL-3725overlappingVirtualFeatures
2 years ago merge/JAL_1842+JAL-3509+releases_Release_2_11_1_Branch
2 years ago feature/JAL-3719_gapColourInAlignmentView_2.11.2
2 years ago feature/JAL-3719_gapColourInAlignmentView
2 years ago cherry-pick/JAL-3691_to_2.11.2_localeSafeFileImport
2 years ago bug/JAL-3705saveProteinId
2 years ago bug/JAL-3706virtualStopCodon
2 years ago bug/JAL-2983negativeSliderMin
2 years ago patch/Release_2_11_1_Branch_patch_JAL-3490
2 years ago bug/JAL-3490findSpanHiddenGaps
2 years ago patch/JAL-3692enaEndpointFlatfile
2 years ago feature/JAL-3692enaEndpoint
2 years ago bug/JAL-3702_Drag_and_drop_miscalculation_in_linux_HiDPI
2 years ago spike/JAL-3622_Scanner_swingjs_J212_merge
2 years ago alpha/merge_212_JalviewJS_2112
2 years ago feature/JAL-3686_slivka_client_js_update
2 years ago features/JAL-3638_jumptonextindel
2 years ago jims/work_on_2_12/JAL-3664_hmmer_ux
2 years ago bug/JAL-3648graphDragRelease
2 years ago cherrypicks/JAL-3660_JAL-3561_JAL-3662_cli_outputformat
2 years ago patch/JAL-3561_JAL-3660_fileformatexport_CLI
2 years ago bug/JAL-3561_translatefileformats
2 years ago Jalview-JS/JAL-3253-applet
2 years ago Jalview-JS/develop.JAL-3446.ctrlDown
2 years ago features/JAL-3641_phredfromfastq
2 years ago Jalview-JS/develop.JAL-3446.SequenceFeatureAsync
2 years ago Jalview-JS/develop.JAL-3445-BSML-reader
2 years ago feature/JAL-3551Pymol
2 years ago bug/JAL-3541_cloverReport_gradle_task_fails
2 years ago feature/JAL-3624siftsInJS
2 years ago bug/JAL-3613emblCDSTracking
2 years ago Jalview-JS/update_java2script
2 years ago alpha/JAL-3362_Jalview_212_alpha
2 years ago bug/JAL-3574filterByPOS
2 years ago JAL-3253_applet_omnibus-BH
2 years ago JAL-3253-applet-SwingJS-omnibus
2 years ago testing/JAL-3577_jalviewversion_autoset_fixed
2 years ago improvement/JAL-3289_new_launch_screens
2 years ago Jalview-JS/JAL-3253-applet-SwingJS-3.2.9.v1e
2 years ago story/JAL-3588_Examples_folder_in_macOS_DMG_Finder_window
2 years ago merge/Jalview-JS_develop_with_develop_build.gradle_gradle.properties_utils_install4j
2 years ago task/JAL-3577_Jalview_Test_installers
2 years ago trial_merge/develop/bug/JAL-247autoIdWidthSeqMarker
2 years ago patch/JAL-3562_fixAlignmentPanelTest
2 years ago Jalview-JS/JAL-3563-sync-TestNG-test-bob
2 years ago Jalview-JS/JAL-3560_bob_temp
2 years ago Jalview-JS/develop-JAL-3559
2 years ago Jalview-JS/JAL-3560-bh-temp
2 years ago improvement/JAL-3394_added_categories_to_unix_shell_installer_desktop_file
2 years ago testbuild/JAL-3412_getIdWidth_test
2 years ago feature/JAL-3468featureDescriptionEllipsis
2 years ago spike/JAL-3548_exampleRestServer
2 years ago bug/JAL-3235sortPropertiesJava9
2 years ago spike/javier_noseqhack
2 years ago improvement/JAL-3543_dont_report_null_versions_in_java_console
2 years ago bug/JAL-3412idWidthDiscrepancy
2 years ago features/JAL-3187_uitweaks
2 years ago improvement/JAL-3449_add_install4j_installer_getdown_versions_to_jalview_console.2
2 years ago bug/JAL-3536getCrossrefTwice
2 years ago bug/JAL-3509hideResnum
2 years ago feature/JAL-3515-slivka-preferences
2 years ago task/JAL-3510-update-clover-to-4.4.1
2 years ago bug/JAL-3341unitTestFails
2 years ago improvement/JAL-3393_Improved_DMG_background_image_beta_strand
2 years ago feature/JAL-3121gffAttributeMap
2 years ago feature/JAL-3499featuresFileMotifs
2 years ago bug/JAL-3502wrappedScale
2 years ago improvement/JAL-3438_eclipse_java_code_formatting_as_a_gradle_task
2 years ago bug/JAL-3477_memory_max_allocation
2 years ago Jalview-JS/develop-updated-gradle
2 years ago patch/JAL-1236_customClustalHeader
2 years ago bug/JAL-3489mapChainsFromFile
2 years ago JAL-3253-applet-test
2 years ago bug/JAL-3487-splash-JS
2 years ago features/r_2_11_2_JAL-819_undeleteAutoAnnotation
2 years ago feature/JAL-3081customAnnOrder
2 years ago merge/Ben_trying_out_JSdevelop_with_develop
2 years ago Jalview-JS/develop-working
2 years ago Jalview-JS/gradle_for_eclipse
2 years ago Jalview-JS/develop_with_gradle_build
2 years ago improvement/JAL-3474_lots_of_.cvsignore_files
2 years ago bug/JAL-3473_SpinnerNumberModel_causing_IllegalArgumentException
2 years ago feature/JAL-3469clinvarVCF
2 years ago JAL-3368_JavaScript_colors
2 years ago JAL-3253-applet-113cc13-2019.08.28-js-optimizations
2 years ago JAL-3437_load_project
2 years ago Jalview-JS/JAL-3253-applet-JAL-3445_support_for_BSML
2 years ago Jalview-JS/JAL-3253-applet-JAL-3453-TestNG-Desktop-getInstanceOnly
2 years ago tasks/JAL-3070_wsinterfaces
2 years ago Jalview-JS/gradle_with_goomph
2 years ago Jalview-jJS/JAL-3253-applet-JAL-3436
3 years ago feature/JAL-3443findColorAsInt
3 years ago feature/JAL-3442colourCaching
3 years ago Jalview-JS/gradle_with_inline_eclipse
3 years ago Jalview-JS/gradle-minimal
3 years ago task/JAL-3394_install4j8_option
3 years ago jalview-headless
3 years ago Jalview-JS/jim/JAL-3253-JAL-3418
3 years ago feature/JAL-3364splitFrameImage
3 years ago task/JAL-3210_ben_testing_jalviewJS_building
3 years ago bug/JAL-3235sortPropertiesJava9-2
3 years ago feature/JAL-3400viewChainsMenu
3 years ago feature/JAL-3187linkedFeatures
3 years ago improvement/JAL-3384_Redirect_stdout_and_stdin_to_files
3 years ago improvement/JAL-3393_DMG_Finder_window_improvements
3 years ago bug/JAL-3388structureChooserSorting
3 years ago bug/JAL-247autoIdWidthSeqMarker
3 years ago features/JAL-3375vcfValidation
3 years ago merge/JAL-3285_mchmmer_with_211_develop
3 years ago features/JAL-3010ontologyFeatureSettings
3 years ago releases/Release_2_11_Branch
3 years ago task/JAL-3337-rm-lib-update-sourceDist
3 years ago task/JAL-3349_Support_cli_JRE_arguments_through_getdown
3 years ago bug/JAL-3178nonposFeatureExport_take2
3 years ago bug/JAL-3330_backpropagateEnsemblFeatureColours
3 years ago bug/JAL-2934proportionalScrolling
3 years ago bug/JAL-2830_editManglesDatasetSequence
3 years ago JAL-3315_getdown_1_8_6_update
3 years ago bug/JAL-3212columnSelectionWithHidden
3 years ago tasks/JAL-3311_removeVamsasMenu
3 years ago bug/JAL-3296changeStartInvalidateCursor
3 years ago feature/JAL-3251biotypedMappings
3 years ago feature/JAL-3187viewstyleFlags
3 years ago bug/JAL-3288splitFrameMenusJava11
3 years ago bug/JAL-3286duplicatePdbQuery
3 years ago task/JAL-3281_Automatic_installers_download_table_generation
3 years ago merge/JAL-3210_developToJSDevelop
3 years ago Jalview-JS/tasks/JAL-3274-build_details
3 years ago task/JAL-3252_adapt_getdown_to_unpack_tgz_resource_files
3 years ago bug/JAL-3239monospacedEps
3 years ago bug/JAL-3244jmolWindows
3 years ago task/JAL-3243_PDB_free_text_error
3 years ago jims/JAL-3130_Java11_Gradle_publishing
3 years ago task/JAL-3193mergeEnsemblGenomes
3 years ago bug/JAL-3218scalePanelPopups
3 years ago Jalview-JS/developPreFrameEmbedding
3 years ago Jalview-JS/demo
3 years ago bug/JAL-3215hydroColours
3 years ago Jalview-JS/20190123
3 years ago bug/JAL-1889serverTestSuite
3 years ago task/JAL-3130_Java_11_investigations-Ben-2-CHANGES_TO_DEPRECATED_CALLS
3 years ago feature/JAL-3127_seqidChainshading
3 years ago feature/JAL-2250colourAllGroups
3 years ago bug/JAL-3201groupClustal
3 years ago bug/JAL-3075
3 years ago tasks/JAL-3035_remove_dasobert_dependency
3 years ago bug/JAL-2907stockholmGapChar
3 years ago bug/JAL-3141_Messages_discrepancy_fix
3 years ago feature/JAL-3205symmetricCalc
3 years ago bug/JAL-3083cancelAnnotationColour
3 years ago feature/JAL-3093wrappedModeTooltips
3 years ago feature/intervalStoreJ
3 years ago merge/develop_feature/JAL-3141_backupfiles_for211
3 years ago Jalview-BH/JAL-3026-JAL-3063-JAXB
3 years ago bug/JAL-3202zerosInProfile
3 years ago merge/JAL-3187_JAL-3010
3 years ago bug/JAL-3195idResolution
3 years ago feature/JAL-3194_create_launcher_with_dynamic_memory_heap_setting
3 years ago feature/JAL-2738GeneLocus
3 years ago feature/JAL-3143ensemblJSON
3 years ago feature/JAL-3190jalviewjsChimera
3 years ago features/pca_jaxb_datasetrefs_JAL-3171_JAL-3063_JAL-1767
3 years ago bug/JAL-3184restoreGroupVisibility
3 years ago feature/JAL-3180colourAnnotationMenu
3 years ago bug/JAL-3183groupColourOverwritten
3 years ago feature/JAL-3181linkOrdering
3 years ago bug/JAL-2621
3 years ago bug/JAL-2791exportFilteredFeature
3 years ago bug/JAL-3171_maintain_datasets_across_views
3 years ago feature/JAL-3169cancelOverwrite
3 years ago bug/JAL-2420revealAllMenu
3 years ago bug/JAL-3166npeAllRowsHidden
3 years ago bug/JAL-3164complementOverview
3 years ago bug/JAL-3158selectionBroadcasts
3 years ago bug/JAL-3162featureStartLtEnd
3 years ago bug/JAL-3161annotationTooltipRange
3 years ago bug/JAL-3154tableColumnDrag
3 years ago feature/JAL-3148structureColourSchemes
3 years ago Jalview-BH/JAL-3026
3 years ago feature/JAL-3144noJTree
3 years ago bug/JAL-3139colocatedFeatures
4 years ago feature/JAL-1244stretchStatusMsg
4 years ago bug/JAL-3120restoreFeatureColour
4 years ago patch/JAL-2755_UniprotEnsemblSubnameWorkaround
4 years ago spikes/jim
4 years ago features/JAL-345_selectFromFind
4 years ago bug/JAL-3099alignmentVisibleWidth
4 years ago bug/JAL-3097blankExtraColumns
4 years ago releases/Release_2_10_5_Branch
4 years ago patch/VAqua_saveload_update_JAL-2988
4 years ago bug/JAL-3065_DH_keyPair_Exception_nogroovysettings
4 years ago bug/JAL-3076ensemblGeneId
4 years ago patch/JAL-2996_JAL-3053_tildeBracketsPipesEtcAsGapChars
4 years ago bug/JAL-3003epsWithSelection
4 years ago task/JAL-3089annLabelsPopup
4 years ago bug/JAL-3088_RNA_secondary_structure_annotation_final-ending-solo-brace_arrow_points_the_wrong_way
4 years ago bug/JAL-247pngShowHiddenSeqMarks
4 years ago features/JAL-3085_gnupdf
4 years ago bug/JAL-3082selectRegex
4 years ago feature/JAL-3080clearTreeGroups
4 years ago bug/JAL-3078cancelTreeFont
4 years ago spikes/mungo
4 years ago testpaches/JAL-2719_JAL-1264_testfails
4 years ago releases/Release_2_10_4_Branch
4 years ago task/JAL-3047_clover2104b1_cherrypick
4 years ago bug/JAL-3072scrollThread
4 years ago task/JAL-3047_clovercoverage
4 years ago features/mchmmer_merge_JAL-1950
4 years ago tasks/JAL-3067_slivkaprep
4 years ago task/JAL-3068lineartDialog
4 years ago Jalview-BH/JAL-3048_exportSettingsrefactor
4 years ago task/JAL-3060featureEditor
4 years ago bug/JAL-3059groupBorder
4 years ago bug/JAL-3049colourCellTooltip
4 years ago Jalview-BH/JAL-3048_dialogs
4 years ago task/JAL-3042_remove_SimpleDocument_dependency
4 years ago features/JAL-3020attributeValuePrompting
4 years ago bug/JAL-2920_uniprotvariantfeature
4 years ago features/mchmmer
4 years ago bugs/JAL-3009_blockingNetworkThreads
4 years ago bug/JAL-3002fastPaintWrapped
4 years ago bug/JAL-2992panelHeight
4 years ago feature/JAL-2994chimeraPath
4 years ago bug/JAL-1460_dragndropWindows
4 years ago bug/JAL-2991_exporttosvgwrapview
4 years ago bug/JAL-797
4 years ago features/JAL-2814ftsHelp
4 years ago patch/JAL-2321_addsecstrForDroppedPDBFile
4 years ago features/JAL-1767pcaInProject
4 years ago features/JAL-2944_openStructuresInSelectedView
4 years ago bug/JAL-914multipleHelpScreens
4 years ago features/JAL-2909_bamImport2_11
4 years ago spikes/kira
4 years ago feature/JAL-2909bamfiles_features
4 years ago features/JAL-2620alternativeCodeTables
4 years ago bug/JAL-2839findWithHidden
4 years ago merges/JAL-2906_update2_11_from_2_10_4
4 years ago bugs/JAL-2922
4 years ago feature/JAL-2909bamfiles
4 years ago bug/JAL-2924nullTooltip
4 years ago feature/JAL-984splitAdjuster
4 years ago features/JAL-2885UniprotHttps
4 years ago bug/JAL-2778again
4 years ago patch/JAL-2914_relaxedGFFpragmas
4 years ago features/JAL-1793VCF
4 years ago spike/JAL-2778_changelookandfeelOpaqueWindows
4 years ago bugs/JAL-2780_JAL-2781_pdbnegativenums
4 years ago kjvdh/features/forester
4 years ago bug/JAL-2666
4 years ago feature/JAL-2759
4 years ago kjvdh/features/CipresWebservices
4 years ago bug/JAL-2899
4 years ago kjvdh/features/PhylogenyViewer
4 years ago spikes/koen
4 years ago releases/Release_2_10_3_Branch
4 years ago bug/JAL-2750
4 years ago bug/JAL-2864nullOverviewCanvas
4 years ago bug/JAL-2876byLabelThreshold
4 years ago task/JAL-2662
4 years ago bug/JAL-2865removeGC
4 years ago bug/JAL-2848resetColoursAmendFeatures
4 years ago kjvdh/features/testing
4 years ago spikes/thomas
4 years ago spikes/toch
4 years ago feature/JAL-2873ensemblSpeciesQuery
4 years ago feature/JAL-2087ensemblSpeciesAssist
4 years ago bug/JAL-2859_uniprottowrongpdbid
4 years ago kjvdh/features/PhylogenyViewer_tabbedsupport
4 years ago bug/JAL-2851
4 years ago bug/JAL-2846
4 years ago bug/JAL-2837
4 years ago bug/JAL-2831
4 years ago bug/JAL-2842
4 years ago bug/JAL-2811
4 years ago bug/JAL-2784
4 years ago doc/JAL-2494_JAL-2828_mergefindAnnotation
4 years ago bug/JAL-2829deleteCharsWithGaps
4 years ago bug/JAL-2791selectVisibleFeatures
4 years ago bug/JAL-2827
4 years ago feature/JAL-2674take2
4 years ago imp/JAL-2774
4 years ago bug/JAL-2821
4 years ago imp/JAL-2775
4 years ago bug/JAL-2776toggleGroupColour
4 years ago releases/Release_2_10_2b1_Branch
4 years ago bug/JAL-2253
4 years ago bugs/JAL-2777_whitespaceChain
4 years ago features/JAL-2773_dontalwaysrecolourstructureonrepaintofoverview
4 years ago bug/JAL-2772pdbArrayBounds
4 years ago bug/JAL-2757_uniprotftsbadquery
4 years ago features/JAL-2523httpRetries
5 years ago features/JAL-2758_shorteruniprot
5 years ago feature/JAL-2745ebiHttps
5 years ago Release_2_9_Branch
5 years ago bug/JAL-2740
5 years ago JAL-2739_2.10.2b1
5 years ago patch/JAL-2732
5 years ago bug/JAL-2728splitFrameDivision
5 years ago bug/JAL-2511idAlignment
5 years ago bug/JAL-2721fastPaintNPE
5 years ago portforward/JAL-2675_2102b1to2103
5 years ago bug/JAL-2722
5 years ago bug/JAL-2673
5 years ago bug/JAL-2617mappedStopCodon
5 years ago bug/JAL-2673_mergewithproblem
5 years ago feature/JAL-2611
5 years ago patch/JAL-2694_maptoallchainsworkaround
5 years ago features/hmmer
5 years ago feature/JAL-2527
5 years ago bug/JAL-2704gapColourFading
5 years ago feature/JAL-2587
5 years ago feature/JAL-2664
5 years ago bug/JAL-2665-2.10.2b
5 years ago bug/JAL-2665-2.10.3
5 years ago bug/JAL-2665
5 years ago features/JAL-250_hideredundantseqs
5 years ago bug/JAL-2691_nomultimermapping
5 years ago features/JAL-2609fastPaintWrapped
5 years ago spike/JAL-1950_hmmer3client
5 years ago feature/2588
5 years ago features/JAL-2446NCList
5 years ago releases/Release_2_10_2_Branch
5 years ago features/JAL-2253ensemblGenomes
5 years ago bug/JAL-2634
5 years ago bug/JAL-2630gradColourUpdateOverview
5 years ago bug/JAL-147scrollWrappedView
5 years ago features/hmmer_statistics
5 years ago feature/JAL-2613
5 years ago bug/JAL-2541_JAL-2823_cutAndRelocateFeatures_needs_merge_from_211_release
5 years ago bug/JAL-2597
5 years ago bug/JAL-2600resizeflicker
5 years ago bug/JAL-1858fastPaintHighlights
5 years ago bug/JAL-2591
5 years ago features/JAL-2136_phyre2_integration_updated
5 years ago bug/JAL-2589gapColour
5 years ago bug/JAL-2592userDefinedScheme
5 years ago bug/JAL-2386groupConservationColouring
5 years ago bug/JAL-2586
5 years ago spikes/phyre
5 years ago features/JAL-2136_phyre2_integration
5 years ago features/JAL-2526sequenceCursor
5 years ago bug/JAL-2576
5 years ago bug/JAL-2577
5 years ago bug/JAL-2578
5 years ago features/JAL-2754findFeaturesByColumn
5 years ago JAL-2571
5 years ago features/JAL-2465_No-mapping_Jmol-structures-loaded-via-url
5 years ago task/JAL-2562_SequenceI.findPosition
5 years ago bug/JAL-2491
5 years ago bug/JAL-2034contextchange
5 years ago bug/JAL-2551
5 years ago features/JAL-2549_updateJABAWSto220
5 years ago bug/JAL-2547tooltipOnGap
5 years ago bug/JAL-2510amendFeatures
5 years ago bug/JAL-2256
5 years ago bug/JAL-2536
5 years ago bug/JAL-2517cancelAppletColour
5 years ago bug/JAL-2507_rnasecstrstockholm
5 years ago bug/JAL-2515
5 years ago bug/JAL-2512
5 years ago features/JAL-2388hiddencolumnschanges
5 years ago features/JAL-2393customMatrices
5 years ago features/JAL-2432_annotbypercent
5 years ago features/JAL-2447experimentalFlag
5 years ago features/JAL-1933_occupancy
5 years ago features/JAL-2476dropFiles
5 years ago bug/JAL-2424getVisibleContigs
5 years ago features/JAL-2473_set-minimium-dimensions
5 years ago bug/JAL-2479unitteststoNetworkGroup
5 years ago bug/JAL-2255_seq-fetcher-broken-on-linux
5 years ago bug/JAL-2314
5 years ago bug/JAL-2461
5 years ago bug/JAL-2431splitFrameNewView
5 years ago bug/JAL-1608createGroups
5 years ago bug/JAL-2399textColour
5 years ago bug/JAL-2346annotationChoice
5 years ago features/JAL-728alternateQuality
5 years ago bug/JAL-2436featureRendererThreading
5 years ago features/JAL-653_JAL-1766_htslib_refseqsupport
5 years ago merge/JAL-2136_phyre2_integration
5 years ago bug/JAL-2374_JAL-2419_overlappinggroups_currentselection_popupmenu
5 years ago features/JAL-2316
5 years ago features/JAL-2379pcaMemory
5 years ago reviews/features/JAL-2136_phyre2_integration_withJims
5 years ago features/JAL-2040_JAL-2137_phyre2
5 years ago features/JAL-2295setChimeraAttributes
5 years ago releases/Release_2_10_1_Branch
5 years ago releases/Release_2_10_Branch
5 years ago features/JAL-2351jmolExchange
5 years ago bug/JAL-2358phantomChimera
5 years ago bug/JAL-2339helpBullets
5 years ago features/JAL-2344FileFormatI
5 years ago features/JAL-2326_JOptionPane-refactoring
5 years ago bug/JAL-2277_refactorPrintUnwrapped
5 years ago features/JAL-2177_update_jmol_to_14.6.4_2016.10.26
5 years ago bug/JAL-2323disulfideOverview
5 years ago bug/JAL-98consensusMemory
5 years ago bug/JAL-2282
5 years ago bug/JAL-2317_jmol_chimera-chain-factorisation
5 years ago features/JAL-2320_closeChimeraAction
5 years ago bug/JAL-2309
5 years ago bug/JAL-2308
5 years ago spikes/geoff
5 years ago spikes/jpred
5 years ago features/JAL-2284_export-biojsmsa-via-cli
5 years ago releases/Release_2_10_0_Branch
5 years ago bug/JAL-2277_html-output-wrapped-mode
5 years ago bug/JAL-2281JAL-2282
5 years ago bug/JAL-2272cmdClickGroupEdit
5 years ago bug/JAL-2283consColourEnabled
5 years ago bug/JAL-1552dragndroptake2
5 years ago task/JAL-2196pdbeProperties
5 years ago feature/JAL-2553ensemblGenomes
5 years ago bug/JAL-2044jmolModelBinding
5 years ago features/JAL-2039_Offer_cached_structurefiles_immediately
5 years ago bug/JAL-1552dragndropurl
5 years ago bug/JAL-2262_dnd-for-local-structure-files
6 years ago bug/JAL-2245enaXmlChange
6 years ago bug/JAL-2210_hack_for_Release_2_10
6 years ago features/JAL-1856dbRefFetcherMessages
6 years ago features/JAL-2094_colourInterface
6 years ago bug/JAL-1803_JAL-2157
6 years ago merge/develop_bug/JAL-2154projectMappings
6 years ago bug/JAL-1841rnaSecStr
6 years ago bug/JAL-2154projectMappings
6 years ago patch/JAL-2068_JAL-2169_multiviewannotworker
6 years ago task/JAL-2164_mcviewforoldjalviewprojects
6 years ago patch/JAL-2156_JAL-2163_saveSplitFrameFromSaveAs_restoreTitles
6 years ago releases/Release_2_9_1_Branch
6 years ago features/JAL-2110_crossRefDuplications
6 years ago spike/phyre2
6 years ago features/JAL-2068groovyAnnotationWorker
6 years ago features/JAL-1812_JAL-2083_groovyBinding
6 years ago codereviews/JAL-1990_IProgressIndicator_jalview.structure
6 years ago features/JAL-2113_emblXml1.2
6 years ago features/JAL-2103
6 years ago merge/JAL-1563_uniprot-free-text-search
6 years ago Release_2_9_0b1_Branch
6 years ago features/JAL-2055alternateFeatureColours
6 years ago groovy/JAL-2074_upgradeto2.4.4
6 years ago features/JAL-1563_uniprot-free-text-search
6 years ago features/JAL-1919_mmCIF-Support
6 years ago mungo_develop
6 years ago bug/JAL-2023_cdsProjectError
6 years ago JAL-1956_featureStyles
6 years ago bug/JAL-1994_Jalviewlite-json-parser-in-browsers
6 years ago features/JAL-1978_msagrid
6 years ago features/JAL-1965_JAL-753_JAL-1427_relaxedIdMatch
6 years ago features/JAL-1479_SIFTS-mapping
6 years ago features/JAL-1705_ensembl
6 years ago features/JAL-666_exportoverview
6 years ago features/JAL-1499_MEGA
6 years ago patch/JAL-1791_timestamp
7 years ago features/JAL-1912_biojson-per-sequence-annotation
7 years ago release/JAL-1645_r29
7 years ago features/JAL-857_dynamic-example-files
7 years ago bug/JAL-1819_isNaN
7 years ago j2s/develop-bh-2
7 years ago j2s/develop-bh
7 years ago j2s/develop
7 years ago j2s/develop-toc
7 years ago features/JAL-1807java2Script
7 years ago features/JAL-1759jmolUpdate
7 years ago j2s/develop-jim
7 years ago j2s/develop-mungo
7 years ago features/JAL-892varnaToProject
7 years ago task/JAL-1794_jettyExamplesServer
7 years ago merge/develop_JAL-1780_JAL-653_JAL-1892
7 years ago features/JAL-1270_JUnit-to-TestNG
7 years ago features/JAL-1782_JUnit-to-TestNG
7 years ago features/JAL-1781annotationXmlIds
7 years ago features/JAL-653_gffalignments
7 years ago features/JAL-1780_export-settings_flatfile
7 years ago schema/JAL-1764_structureViewAttribute
7 years ago features/JAL-653_rebased_gffalignments
7 years ago features/JAL-1601_jpred4rest
7 years ago features/JAL-1740_Decoup-BioJS
7 years ago features/JAL-1740_BioJsAutoUpdater
7 years ago bug/JAL-1712annotationsWithFlanking
7 years ago Release_2_8_2b1_Branch
7 years ago features/JAL-1641_JSON
7 years ago features/JAL-1725chimeraListener
7 years ago Pre_R29_develop
7 years ago bug/JAL-1697_browse-local-structures
7 years ago bug/JAL-1698_Append-Structures
7 years ago bug/Jal-1696_disable-pdb_id-field-settings
7 years ago features/JAL-1667_PDBe_Search_API
7 years ago hack/JAL-1617_workaround
7 years ago features/JAL-845splitPaneMergeDevelop
7 years ago bug/JAL-1643_File-chooser-improvement
7 years ago features/sequenceFeatureRefactor
7 years ago merge/JAL-845_JAL-1640
7 years ago features/JAL-1641_JSON-File-format
7 years ago bug/JAL-1644_Finder-logic-improvement
7 years ago features/JAL-845linkedProteinDnaEditing
7 years ago features/JAL-1553_improvement-select-column-by-annotation-row-query-interface
7 years ago features/JAL-1553_select-columns-by-annotation
7 years ago features/JAL-1605_html-svg-export
7 years ago Release_2_8_2_Branch
7 years ago features/JAL-1469_svg-output-for-figure-export
7 years ago features/JAL-1541_BioJsMSAViewer-export-option
7 years ago features/JAL-1550_intermine-sequence-annotation-client
7 years ago Release_2_8_1_Branch
7 years ago JAL-1550_intermine-sequence-annotation-client
7 years ago features/JAL-1264_showHideAnnotations
8 years ago JAL-429_phylip-file-support
8 years ago Release_2_8_2_Branch_i18n
8 years ago JAL-1562_help-documentation-system-refactoring
8 years ago spikes/jims_test
8 years ago features/JAL-1499
8 years ago JAL-1260_droldan
8 years ago Release_2_8_1_Branch_i18n
8 years ago Release_2_8_0b1_Branch
8 years ago Release_2_8_Branch
8 years ago WIP_fix_JAL-1423
9 years ago RNAalifold
9 years ago JAL-1375_ncbiclient
9 years ago JalScape/JAL-1332
9 years ago JAL-1199-Stk_writing
9 years ago Release_2_7_Branch
10 years ago Tcoffee_JAL-1065
11 years ago 2_5_1_rna_merge
11 years ago Release_2_6_Branch
12 years ago Release_2_5_Branch
12 years ago Release_2_4_branch
15 years ago Release_2_3_BuildFix
16 years ago VamJalview
16 years ago vamsasDemo